Xanthomonas campestris pv. campestris ATCC 33913: XCC4026
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Entry
XCC4026 CDS
T00083
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc03420
Nucleotide excision repair
xcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XCC4026 (uvrD)
03430 Mismatch repair
XCC4026 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcc03400
]
XCC4026 (uvrD)
Enzymes [BR:
xcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XCC4026 (uvrD)
DNA repair and recombination proteins [BR:
xcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XCC4026 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
XCC4026 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
DUF6825
InPase
Motif
Other DBs
NCBI-ProteinID:
AAM43247
UniProt:
Q8P3P3
LinkDB
All DBs
Position
complement(4772627..4774813)
Genome browser
AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQSLELDETKYPPKQMGWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQE
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
SGHVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQ
SRALEEALIAEQLPYRVYGGMRFFERAEIKDALAYLRMLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARANALSLWEAAMLCTQENTLAARARNALATFLSLVGQLQAETGEMDLAE
RIDHVLMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPKVQVSRTAS
LGAARGGPVHAVVDAAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVM
AYANLTVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatttaaaccccgcccagcgcgaggccgtttccgcg
ccgccggggcattaccttgtgctggccggcgccggctccggcaagacgcgcgtgctgatc
catcgcattgcctggctcaatgaagtccagggcgtgccaaaccacggcatcttcgcggtg
accttcaccaacaaggccgccggcgaaatgcgccaccgcaccgacctgcaactgcgcaac
ggcagccgcgggatgtggatcggcaccttccatgggctggcccatcgcctgctgcgcctg
cactggcaggacgcgcggctgccggaaggcttccaggttatggacagcgacgaccagcta
cggctggtcaagcgcgtggtgcagtcgctggagctggacgagaccaagtatccgcccaag
cagatgggctggtggatcaacgagcagaaggacgaaggccgccgcccgcaacacatccag
cccgagcccaacgacgactggaccgaggtgcgccggcaggtgtacgccgcctaccaggaa
cgctgcgaccgctccgggctgctggatttcgccgagctgctgctgcgcgcgcacgaatta
ctgcgcgacaccccggccttgctggcgcattaccgcgcgcgcttccgcgaaattctggtc
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgcttgccggcgag
agcggccacgtattcgtggtgggcgacgacgaccaggccatctacggctggcgcggtgcc
aaggtcgagaacgtgcagcgcttcctcaaggatttccccggtgcgcagacggtgcggctg
gagcagaactaccggtccagcgccaatattctgggcgcggccaatgcggtgatcgcgcat
aaccccgaccgcatcggcaagcagttgtggaccgattccggcgatggcgacccgatcgat
ctgtacgcggcctacaacgaagtcgacgaggcccgctatgtagtcgagcgcgcgcgccag
tgggtgcgcgatggcggcagctatggcgaagtggcggtgctctatcgcagcaatgcgcaa
tcgcgcgcgctggaagaagcactgattgccgaacaactgccgtaccgcgtgtatggcggc
atgcgctttttcgaacgcgccgaaatcaaggacgcgctggcgtacctgcgcatgctcacc
aaccgcagcgacgatgcggcgttcgagcgcgcggtcaacacgcccacgcgtggcattggc
gatcgcaccctggatgaagtgcgccggctggcacgcgccaatgcgctgtcgctgtgggaa
gcggcaatgctgtgcacgcaggaaaatactcttgcggcgcgtgcacgcaatgcgctggct
acgttcctgagcctggtcggccagctgcaggccgaaaccggcgagatggacctggccgag
cgcatcgaccatgtgctgatgcgctcgggcctgcgcgagcattgggccaaggaaagccgc
ggcgggctggattcggaatcgcgcaccgagaacctggacgaactggtctcggtggcctcg
cgcttcacccgcccggacgatgaagacagccagggcatgaccgaactggtggccttcctc
gcctacgcctcgctggaagccggcgaaggccaggcgcaggccggcgaagaaggcgtgcag
ctgatgacgttgcactcggccaagggcctggaatttccgatcgtgttcctggtcgggctg
gaagacggcctgttccccagcgcacgctcgctggaagaaagcggccggctcgaagaagaa
cgccgcctggcctacgtgggtatcacccgcgcgcgccagaagctggtgctgtgctacgcc
gaatcgcggcgcatccacggccaggacaactacaacgtgccgtcgcgctttctgcgcgag
atcccgcgcgacctgctgcatgaagtgcggcccaaggtgcaggtctcgcgcaccgcctcg
ctgggcgccgcacgcggcggcccggtacatgccgtggtggacgccgcgccgatcaagctc
ggcgccaatgtcgaacaccccaagttcggtggcggcgtggttgtcgactacgaaggcgcc
ggcgcgcatgcacgcgtgcaggtgcaattcgatgaagtgggcgccaagtggctggtgatg
gcgtacgcgaatctgacggtggtgtag
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