Xanthomonas cannabis: RZV17_01170
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Entry
RZV17_01170 CDS
T11825
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
xcd Xanthomonas cannabis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_50
HTH_30
AAA_22
AAA_16
AAA_2
HTH_28
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XCO32941
LinkDB
All DBs
Position
278358..279704
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AA seq
448 aa
AA seq
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MARILIIDDDAAFRMTLQATLRSLGHAVVSAENGPDGLARLSEGGIDMAFVDFRMPGMDG
IAVLRARQDDAQARQVPLVMLTAHVSSGNTIEAMTLGAFDHLVKPVGRADIVEVVQRALL
SRADAQAAATETPRASDEDDDALVGHSPAMRTVHKRIGLAAASELSVLITGETGTGKELA
ARALHRASPRANAPFVAVNCAAIPLELMESELFGHRKGAFSGAGSDRLGLIREADGGTLF
LDEIGDMPLPMQAKLLRFLQEGEVTPLGGSGPQNVDVRVLAATHRDLAACVADGRFRSDL
RYRLNVVPIELPPLRERGQDILLLARHFLGASAARAQRLSPAAQERLLAHSWPGNVRELR
NVMQRSQVLVRGASIDAADLDEALAEISEPPPAIVPEPTGTLPEAVARLEKQMIQSALAQ
SRGNRAEAARRLGIHRQLLYRKLEEYGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatcctgatcatcgacgacgatgccgcgtttcgcatgaccctgcaggccacc
ttgcgctcgctcgggcacgcggtggtcagcgccgagaacgggccggacgggctggcccgg
ctgagcgagggcgggatcgacatggcgttcgtggatttccgcatgccgggcatggacggc
atcgcggtgctgcgtgcgcgccaggacgatgcgcaggcgcgtcaggtgccgctggtgatg
ctcactgcccatgtgtccagcggcaacaccatcgaggcgatgacgctgggcgccttcgat
cacctggtcaagccggtgggccgcgccgacattgtcgaggtggtgcaacgtgcgctgctc
agtcgcgccgatgcgcaggctgcggcaactgaaacgccacgtgcgtcagacgaggacgac
gacgcgctggtgggacacagcccggcgatgcgcacggtgcacaagcgcatcgggctggcg
gcggcgtccgagttgtcggtgttgatcaccggggaaaccggtaccggcaaggagctggcc
gcacgcgccctgcatcgcgccagcccacgtgccaacgcgccgttcgttgcggtcaactgc
gcggccattccgctggagctgatggagagcgagttgtttggccatcgcaagggtgcgttt
tccggcgccggcagtgaccgtctggggctgattcgcgaggccgacggcggcacgctgttc
ctggacgagattggcgacatgccactgccgatgcaggccaagctgctgcggtttctgcag
gaaggcgaggtgacgccgttgggtggcagcggcccgcagaacgtggatgtgcgcgtgctg
gccgccacccatcgcgacctggcggcctgcgtggccgatggacgctttcgcagcgatctg
cggtaccggctcaacgtggtgccgatcgaactgccgccgttgcgcgagcgtggccaggac
atcctgctgctggccaggcacttcctcggcgccagcgcagcgcgcgcgcagcgcctgtcg
cctgccgcgcaagagcgcctgctcgcgcacagctggcccggcaacgtgcgcgaactgcgc
aacgtcatgcaacgcagccaggtgctggtgcgcggagccagcatcgatgcggccgatctg
gacgaggcactggccgagatcagcgagccgccgcccgccatcgtgccggagccgaccgga
accctgccggaggccgtcgcacggctggagaaacagatgatccagtccgccctggcgcag
agccggggcaaccgtgccgaggccgcgcggcggctcggaatccaccggcaactgctctat
cgcaagctggaggaatacggcctgtga
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