Xanthomonas cannabis: RZV17_01510
Help
Entry
RZV17_01510 CDS
T11825
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
xcd Xanthomonas cannabis
Brite
KEGG Orthology (KO) [BR:
xcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcd03019
]
RZV17_01510 (hrpB)
Enzymes [BR:
xcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RZV17_01510 (hrpB)
Messenger RNA biogenesis [BR:
xcd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RZV17_01510 (hrpB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
WHD_HA2
DUF697
ResIII
Motif
Other DBs
NCBI-ProteinID:
XCO33008
LinkDB
All DBs
Position
complement(350743..353244)
Genome browser
AA seq
833 aa
AA seq
DB search
MTDPAFPISPLLPQIRDSLAAHPRLVLEAPPGAGKTTQVPLALLDAPWLAGRTIVMLEPR
RVAARSAAQFMARQLGEPVGETVGYRIRFENKTSARTRIEVVTEGILTRMIQDDPMLEHV
GALLFDEFHERHLAGDLGLALALDVQAQLRDDLRIVAMSATLDGERLAGFLEAPRLSSAG
RSFPVDIAHFPARRDEALVPQTRRAVEHALATHPGDVLVFLPGQREITRVHGALQEALDP
AVQVLPLHGELSVEAQTQVLQPDPQGRRRVVLATNVAESSVTLPGVRVVIDSGQAREPHY
DPNSGFSRLDVATISQASADQRAGRAGRVASGWAYRLWPQSQRLEPQRRAEITQVELAGL
ALELAAWGSDALRFVDAPPTGALAAARELLQRLGALGASGGVTALGRRMLALGTHPRLAA
MLAQADDAPRLALACDLAALLEARDPLRQGGDGLAARWRALAAFRQGRTGSDANRGGLAA
IDSAAKQWRRRLRCDSAPPSSVEAHALGDLLSHAFPDRIAARHPADPLRYLLANGRSARL
FDHSDLRGEPWLVASELRYEAKDALLLRAAPVDEGYLRRSLPERFVQQDVVQWDADKRAL
VARRQSSFDRIVLDSRPAGRVDPAQAAGALTAAVRQLGLDALPWTDNLQQWRARVQSLRV
WMPELALPDLSDTTLLDTLDTWLRPAFVGKTRLDALDEASLGEALKAALPWERRQGIDRH
APTRISVPSGMERQISYTLDHAQQPLPPVLAVKLQELFGLAETPRIADGRIPLTLHLLSP
GGRPLQVTQDLKSFWANTYPDVKKEMKGRYPRHPWPDDPWTAAATHRAKPRGT
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccgcctttccgatctctccgttgttgccgcagattcgcgacagcctcgcc
gcccatccacggctggtcctggaagcgccgcccggcgccggcaagaccacccaggtaccg
ctggcgctgctggacgcgccatggctagccgggcgtaccatcgtgatgctggaaccgcgc
cgcgtggcggcgcgcagcgcggcgcaattcatggcgcgccagctcggcgagccggtcggc
gagaccgtgggctaccgcatccgcttcgagaacaagacctccgcgcgtacccgtattgaa
gtggtcaccgagggcatcctgacccggatgatccaggacgaccccatgctggaacacgtg
ggcgcactgctgttcgacgagttccacgagcgccatctggccggcgacctgggtctggcg
ctggcactggatgtccaggcgcagctgcgcgacgacctgcgcatcgtggcgatgtcggcc
acgctggatggcgagcggctggccggctttctggaggccccgcggctgagcagcgccggg
cgcagttttccggtggacattgcgcatttccctgcgcgacgcgacgaagcgctggtaccg
cagacccggcgcgcggtggagcatgcactggccacccatcccggcgatgtgctggtgttc
ctgcccggccagcgcgaaatcacgcgtgtgcacggcgccttgcaggaagcgctggacccg
gccgtgcaggtgttgccgttgcacggcgaattgtcggtggaggcgcagacgcaggtcctg
caacccgacccgcaggggcgccggcgcgtggtgctggccaccaacgtggccgagtcatcg
gtgacgctgccgggcgtgcgcgtggtgatcgacagcggccaggcgcgcgagccgcactac
gaccccaacagcgggttctcacggctggacgtggccaccatttcgcaggcctcggccgac
cagcgcgccgggcgtgccggacgcgtggctagcggctgggcctaccggctgtggccgcag
tcgcagcggctggaaccgcagcgccgcgccgagatcacccaggtggagctggccggcctg
gcgctggagctggccgcctggggcagcgatgcgctgcgctttgtcgatgccccacccacc
ggcgcgctggccgccgcgcgcgaactgctgcaacggctgggtgcgctcggcgcctccggc
ggcgtgaccgccctgggccggcgcatgctcgcgctgggcacgcatccgcggctggcagcg
atgctggcgcaggccgatgatgcgccccgcctggccctggcctgcgatctggccgcgctg
ctggaggcgcgcgacccgctgcgtcagggcggcgatggattggcagcgcgctggcgtgcc
ctggccgcgtttcgtcagggccgtaccgggtccgacgccaatcgcggtggcctggctgcc
atcgacagcgccgccaaacaatggcgacgccggctgcgctgcgacagcgccccgccatcc
agcgtggaggcgcacgcactcggcgatctgctctcccatgccttcccggaccgcatcgcc
gcgcgccaccccgccgacccgctgcgctacctgctggccaacggccgcagcgcgcgcctg
ttcgaccacagcgatctgcgcggcgaaccgtggctggtcgccagcgagctgcgctacgaa
gccaaggacgccctgttgctgcgtgccgcgccggtggacgaaggctatctgcgccgcagc
ctgcccgagcgcttcgtgcagcaggacgtggtgcagtgggacgccgacaaacgcgccttg
gtcgcgcgccgccaatccagtttcgaccgtatcgtgctcgacagccgcccggccggccgc
gtcgacccggcacaggcggccggcgcgctcaccgccgcggtacgtcaactcggtctggac
gcattgccatggactgacaacctgcagcagtggcgcgcacgcgtgcagtcgctgcgcgtc
tggatgccggagctcgccttgcccgatctctctgacaccacgttgctggacacgctggac
acctggctacgcccggcgtttgtggggaaaaccaggctcgacgcgctggacgaggccagc
ctgggcgaagcactcaaggccgcactgccgtgggagcgccgccagggtatcgaccgtcac
gcccctacccgcatcagcgtgccatcgggcatggagcggcagatcagctacaccctcgac
cacgcccagcagccattgccgccggtgctggcggtcaagctgcaggaactgttcggcctg
gccgaaaccccgcgcatcgccgacggccgtatcccgctgaccctgcacctgctctcgccc
ggcggccgcccactgcaggtgacccaggacctgaagagcttctgggccaacacctacccg
gacgtcaagaaagagatgaaagggcggtatccgcggcatccttggccggacgacccctgg
accgccgctgcaacacacagagcaaaaccacgtggcacctga
DBGET
integrated database retrieval system
