Xanthomonas cannabis: RZV17_02625
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Entry
RZV17_02625 CDS
T11825
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
xcd Xanthomonas cannabis
Brite
KEGG Orthology (KO) [BR:
xcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcd03000
]
RZV17_02625 (fis)
03036 Chromosome and associated proteins [BR:
xcd03036
]
RZV17_02625 (fis)
03400 DNA repair and recombination proteins [BR:
xcd03400
]
RZV17_02625 (fis)
Transcription factors [BR:
xcd03000
]
Prokaryotic type
Helix-turn-helix
Other families
RZV17_02625 (fis)
Chromosome and associated proteins [BR:
xcd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RZV17_02625 (fis)
DNA repair and recombination proteins [BR:
xcd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RZV17_02625 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Phage_NinH
HTH_29
BrkDBD
Xre-like-HTH
ZNHIT3_C
HTH_28
HTH_23
HTH_17
Motif
Other DBs
NCBI-ProteinID:
XCO33209
LinkDB
All DBs
Position
complement(616865..617137)
Genome browser
AA seq
90 aa
AA seq
DB search
MNAASSRPDTSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYEIVLREMEIPLFVEVLN
HCEGNQSRAAAMLGIHRATLRKKLKEYGLT
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcagcctcctcccgtcctgacaccagtcgtggcgcccccaagtcgcccctgcgc
gaacacgtggcgcagtccgtgcgccgttatctgcgcgacctggatggcagcgacgcggac
gatgtatacgagatcgtgctgcgcgaaatggaaatcccgttgttcgtcgaagtgctcaac
cactgcgaaggcaaccagagccgcgccgcggcgatgctgggcattcaccgggccacgttg
cgcaagaagctgaaagagtacgggctgacctaa
DBGET
integrated database retrieval system
