Xanthomonas cannabis: RZV17_10640
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Entry
RZV17_10640 CDS
T11825
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xcd Xanthomonas cannabis
Pathway
xcd00020
Citrate cycle (TCA cycle)
xcd00190
Oxidative phosphorylation
xcd00650
Butanoate metabolism
xcd00720
Other carbon fixation pathways
xcd01100
Metabolic pathways
xcd01110
Biosynthesis of secondary metabolites
xcd01120
Microbial metabolism in diverse environments
xcd01200
Carbon metabolism
Module
xcd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xcd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xcd_M00149
Succinate dehydrogenase, prokaryotes
xcd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xcd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RZV17_10640 (sdhA)
00650 Butanoate metabolism
RZV17_10640 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RZV17_10640 (sdhA)
00720 Other carbon fixation pathways
RZV17_10640 (sdhA)
Enzymes [BR:
xcd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RZV17_10640 (sdhA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
XCO30995
LinkDB
All DBs
Position
complement(2503234..2505024)
Genome browser
AA seq
596 aa
AA seq
DB search
MSAYKITEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEEGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV
CRGVLALDMADGTLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPVQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTVE
IREGRGVGEHKDHILLDLTHLGPEVINDKLPGIAESAHIFAGVDVTKQPIPVLPTVHYNM
GGIPTNYYGEVVRKQGDNPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETVKTNQPHKPLPSDACDKALGLLDKLRYANGSTPTSVIRDNMQRTMQSDAAVFRTS
KTLKEGVDKMAEIFASFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHSHEDFPDRDDVNWQKHTLVTVDDKGKCEFEYRPVHMYTLSKDVDVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagatcacagaacacaagtacgacatggtcgtggtaggcgccggcggt
gccggcctgcgcgccacgttcggtctggcccagaagggcttgcagaccgtctgcctgacc
aaggtcttcccgacccgttcgcataccgttgccgcgcagggcggtatttccgcggcgctc
ggcaacatgggcgaggacgactggcgctatcacttctacgacaccatcaagggctccgac
tggctgggcgaccaggacgcgatcgagtacatgtgtcgcgaggcgatcccggccatcatc
gagctggagcactacggtgtgccgttctcgcgcaccgaagagggcaagatctaccagcgt
ccgttcggcggcatgaccaccaagtacggcgaaggcccgtccgcgcagcgcacctgcgcc
gcagccgaccgtaccggccacgccatgttgcacacgctgtaccagcagtcgctggcgcac
aacgcgcgcttcatgatcgagtatttcgcactcgacctgatcttcgacgaagaaggcgtc
tgccgcggcgtgcttgcgctggacatggccgatggcacgttgcacctgttccgcgcccat
ggcgtggtgctggccaccggcggttacggccgtgcctatttcagcgccacctccgcgcat
acctgtaccggtgacggcggcggcctggtgatgcgtgccggcctgccggtgcaggacatg
gagttcgtgcagttccatcccaccggcatttatggtgcgggctgcctgatcaccgagggc
gtgcgcggcgaaggcggcattctgcgtaacagcaatggcgagcgcttcatggagcgctat
gcaccgcactacaaggatctggcctcgcgcgacgtggtgtcgcggtcgatgacggtggag
atccgcgaaggccgtggcgtgggcgagcacaaggaccacatcctgctcgacctgacccac
ctcggcccggaagtgatcaacgacaagctgcccggtatcgccgagagcgcgcacatcttt
gccggtgtggacgtgaccaagcagccgattccggtgctgccaaccgtgcactacaacatg
ggtggcatcccgaccaactattacggcgaagtcgtgcgcaagcagggcgacaacccggac
gcggtggtgcccggtctgtacgccatcggcgaagctgcctgcgtgtcggtgcatggcgca
aaccgcctgggctccaactcgttgctggacctggtggtgttcggtcgtgcggtggccaac
cgttgcgccgaaacggtcaagaccaaccagccgcacaagccgctgccgtccgatgcctgc
gacaaggcgctgggcctgctggacaagctgcgctatgccaacggctccacgccgacctcg
gtgatccgcgacaacatgcagcgcaccatgcagtcggacgcggccgtgttccgtaccagc
aagacgctgaaggaaggcgtggacaagatggccgagatcttcgcttccttcgaagacgtc
aaggtgtcggaccgctcgctggtgtggaactcggacctgatcgagacctacgaattgaac
aacctgctgctcaatgcagtggcgacgatcaattcggccgagcaacgcaaggaaagccgt
ggcgcgcactcgcacgaggacttcccggaccgcgacgacgtcaactggcagaagcacacg
ctggtgaccgtcgacgacaagggcaagtgcgaattcgagtatcgcccggtgcacatgtac
acgctgagcaaggacgtggacgtggtcccgccgaagccgcgcgtgtactga
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