Xanthomonas cannabis: RZV17_15350
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Entry
RZV17_15350 CDS
T11825
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xcd Xanthomonas cannabis
Pathway
xcd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RZV17_15350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xcd02022
]
RZV17_15350
02035 Bacterial motility proteins [BR:
xcd02035
]
RZV17_15350
Two-component system [BR:
xcd02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
RZV17_15350
Bacterial motility proteins [BR:
xcd02035
]
Pilus system
Twitching motility proteins
RZV17_15350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
CR_prot_dom_plant
Pre_tape_measure
AAA_22
HTH_30
Motif
Other DBs
NCBI-ProteinID:
XCO31850
LinkDB
All DBs
Position
3633653..3635047
Genome browser
AA seq
464 aa
AA seq
DB search
MNEPKSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLANNPYDLCLTDMRLPD
GNGIELVTEIARHYPQTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDIGVLRGLVKHAL
ELNNRDRPTPPPPPPEQASRLLGDSTAMESLRATIGKVARSQAPVYIVGESGVGKELVAR
TIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLFLD
EVAELPLQMQVKLLRAIQEKSVRPVGASGETLVDVRILSATHKDLGDLVSDGRFRHDLYY
RINVIELRVPPLRERGGDLPQLAAAIIARLAHSHGRPIPLLTPSALDALDQYGFPGNVRE
LENILERALALAEDDQISASDLRLPAHGGHRLAAAPGSAAVEPREAVHDIDPASAALPSY
IEQLERAAIQKALEENRWNKTKTAAQLGITFRALRYKLKKLGME
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacccaaaagcgccctggttgtcgatgacgagcgagatatccgcgagttgctt
gttctcaccctgggccgcatgggcctgcgcatcagcaccgccgccaacctggccgaagcg
cgcgagttactggccaacaacccgtacgacctgtgcctgaccgacatgcggttgcccgac
ggcaacggcatcgaactggtcaccgaaatcgcaaggcactacccgcagaccccggtggcg
atgatcaccgccttcggcagcatggacctggccgtggaagcgctgaaggccggcgccttc
gacttcgtgagcaagccggtggacatcggcgtgttgcgtggcctggtcaagcacgcgctg
gaattgaacaaccgcgaccgccccaccccgccaccgccgccaccggaacaggccagccgc
ttgctgggcgattcgaccgcgatggaaagcctgcgcgccaccatcggcaaggtggcgcgc
agccaggcgccggtctatatcgtcggcgaatcgggcgtgggcaaggagctggtggcgcgc
accatccacgagcagggcgcgcgcgcggccggccccttcgtgccggtcaactgcggcgcc
atcccggccgaattgatggaaagcgagttcttcggccacaagaaaggcagcttcaccggc
gcgcatgccgacaagccgggcctgttccaggccgcacacggcggcacgctgttcctggac
gaagtggccgagctgccgctgcagatgcaggtcaagctgttgcgcgcgatccaggaaaag
tcggtgcgcccggtcggcgcctcgggcgaaaccctggtggacgtccgcatcctgtcggct
acccacaaggacctgggcgacctggtctccgacggccgcttccgtcacgacctgtactac
cgcatcaacgtgatcgaactgcgcgtcccaccactgcgcgaacgcggtggcgacctgccg
caactggccgccgccatcatcgcccggctggcgcatagccatggccgccctatcccgctg
ctgacgccctcggcgctcgacgcgctggaccagtacggcttccccggcaacgtgcgcgag
ctggaaaacatcctcgaacgcgccctagccctggccgaggacgaccagatcagcgccagc
gacctgcgcctgcccgcccacggcggccaccgcctcgccgccgcccccggcagcgccgcc
gtggaaccgcgcgaagccgtccacgacatcgacccggcgtccgccgcactgccttcctac
atcgagcaactggagcgcgccgcgatccagaaagcgctggaagaaaaccgctggaacaag
accaagaccgccgcgcagctgggtatcacgtttcgggcgttgcggtacaagttgaagaag
cttgggatggagtag
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