Xanthomonas cannabis: RZV17_19165
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Entry
RZV17_19165 CDS
T11825
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xcd Xanthomonas cannabis
Pathway
xcd03420
Nucleotide excision repair
xcd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RZV17_19165 (uvrD)
03430 Mismatch repair
RZV17_19165 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcd03400
]
RZV17_19165 (uvrD)
Enzymes [BR:
xcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RZV17_19165 (uvrD)
DNA repair and recombination proteins [BR:
xcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RZV17_19165 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RZV17_19165 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
InPase
Motif
Other DBs
NCBI-ProteinID:
XCO32541
LinkDB
All DBs
Position
complement(4523541..4525727)
Genome browser
AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQSLELDEGKYPPKQLSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQE
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
SGNVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQ
SRALEEALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARANALSLWEAAMLATQENSLAARARNALATFLSLVGQLHAETGEMELAE
RIDHVLMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEETGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLNEVRPKVQVSRTAS
LGAARGGPVHGIVETAPIKLGANVEHPKFGGGVVIDYEGAGAHARVQVQFDEVGAKWLVM
AYANLTVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatttaaaccccgcccagcgcgaggccgtttccgcg
ccgccggggcattacctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatc
catcgcatcgcctggctcaacgaagtccagggcgtgccgaatcacggcatcttcgcggtg
accttcaccaacaaggccgccggcgaaatgcgccaccgcaccgacctgcagctgcgcaac
ggcagccgcgggatgtggatcggcaccttccacgggctggcgcatcgcctgctgcgcctg
cactggcaggacgcgcgcctgccggaagggttccaggtcatggacagcgacgaccagctg
cggctggtcaagcgcgtggtgcagtcgctggaactggacgaaggcaaatatccgcccaag
caactgagctggtggatcaacgagcagaaggacgagggacgccgtccgcagcatatccag
cccgagcccaacgacgattggaccgaggtgcgccggcaggtatacgcggcctaccaggaa
cgttgcgaccgctccggcctgctggattttgccgagttgctgctgcgcgcgcatgagttg
ctgcgcgatacgccggccctgctggcgcattaccgcgcgcgctttcgcgagatcctggtc
gacgaattccaggacaccaacgccatccagtacgccttcgtgcgggtgctggccggcgag
tccggcaacgtgttcgtggtcggcgacgacgaccaggccatctatggctggcgcggtgcc
aaggtcgaaaacgtgcagcggttcctgaaggatttccccggcgcgcagaccgtgcgcctg
gagcagaactaccgctccagcgccaatatcctgggcgcggccaatgcagtgatcgcgcac
aaccccgaccgtatcggcaagcagctgtggaccgactcgggcgatggcgacccgatcgat
ctgtatgcggcctacaacgaagtggacgaagcgcgctatgtggtcgagcgcgcccggcag
tgggtgcgcgatggcggcagctacggcgaagtggcggtgctctaccgcagcaacgcgcaa
tcgcgcgcgctggaagaggcgctgatttccgaacagctgccctaccgcgtgtatggcggc
atgcgcttcttcgagcgtgcggaaatcaaggacgcgctggcttacctgcgtttgctcacc
aatcgcagcgacgacgccgcgttcgaacgcgcagtcaacacgcccacgcgcggcattggc
gaccgcacgctggatgaagtgcgccgtctggcgcgcgctaacgctttgtcgttgtgggaa
gcggcaatgctggccacgcaggaaaacagcctggccgcgcgtgcgcgcaatgccttggcc
acgttcctgagcctggtcggccagctgcatgccgaaaccggtgaaatggagctggccgaa
cgcatcgaccacgtgctgatgcgttcgggcctgcgcgagcactgggccaaggaaagtcgc
ggcgggctggattcggagtcgcgcaccgagaacctggacgaactggtctcggtggcttcg
cgcttcacccgccccgacgacgaagacagccagggcatgaccgagctggtcgcgttcctg
gcctatgcctcgctggaggccggcgaaggccaggcgcaggccggcgaagaaggcgtgcag
ctgatgacgctgcattcggccaagggcctggaatttccgatcgtcttcctggtcgggctg
gaagatggcctgtttccaagcgcacgctcgctcgaagagaccggccggctggaagaagag
cgccgcctggcctacgtgggcatcacccgcgcgcggcagaagctggtgctgtgctacgcc
gaatcgcgccgcatccacggccaggacaactacaacgtgccttcgcgcttcctgcgcgag
attccacgcgatctgttgaacgaagtgcgcccgaaggtgcaggtctcgcgcaccgcctcg
ctgggcgcggcgcggggcggcccggtgcacggcatcgtggagacggcgccgatcaagctc
ggcgccaacgtcgagcaccccaagttcggcggcggtgtggtcatcgattacgaaggggcc
ggcgcgcacgcccgcgtgcaggtgcagttcgacgaagtcggcgccaagtggctggtaatg
gcgtacgccaatttgacggtggtgtaa
DBGET
integrated database retrieval system
