| Entry |
|
|---|
| Name |
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
|
|---|
| KO |
| K21449 | trimeric autotransporter adhesin |
|
|---|
| Organism |
xce Xylanimonas cellulosilytica
|
|---|
| Brite |
KEGG Orthology (KO) [BR:xce00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:xce02000]
Xcel_0206
Transporters [BR:xce02000]
Other transporters
Pores ion channels [TC:1]
Xcel_0206
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
242785..247110
|
|---|
| AA seq |
1441 aa
MTDVYIESGDQPSSPSDAELILEVRGGDLDAYGALYARHAGAARRLAQSYVRNAADADDV
VADAFARVLRVLQSGRGPDQMFRAYLFTVVKNVAIEVAKGHRRMQPTDDEATFETALFSE
VSSEDPTLAGFEKTVVSRAYRNLPERWQAVLWYTEVEGYTPAQIAPVLGLTANGVSALAY
RAREGLRVGYLQEHLSGFTADGCRTVNPLLGGYVRGSLASREIAKVDAHLKTCGDCRTLV
LELSDVAHGMRGVIAPLVLGGLGLGLVSALPLGALVGAGVTSAAGAAGGAGVVGGAATGA
TVTGSFGAAGSAGTAGAAAGTAGAAGTAGATAGVGAGAAGATGAATGAVAGTAGATTAGA
AAASSGAGSIAAGLGAATASVATSAGSAAAATGTTAVTAATTAASSTAVASTLAASTAGA
VVGTSSVAAAASAVAVAAVGVVTVLHALAPSSGDIPTPQATSIVTTLPGLQAPAEIGPVE
PTPQVSPSQLPAFAQAPVVALVDPAKLAVAPVSTGTLQPRVPQRVKLTVANTGEQTAVGT
TVRFDLADGLSPVFASSTGARGAPIAGLPLDAAALPCRPADDDADVVCRLGDVPGGSTTT
FAFDVVARNGGTYDITGQVWASGLKPSAIALVPAVVDHYGAELTAELGTLDDLANPGVGT
LPVSVVNSGDEPAAEGWSVDVTLPDGLTLAGVEGGLDCTTDPQAAGHLTCVAANPATLRP
GVGAFASLRVLAPATPTNGTLTARAIPVAADGGHVVAGTGAINVQAPWAGAAPIGVTTWC
AATGNLATADVVVGGTFVNTTSQTVTARLEAAGSAAVGRALAPGESVRLALHDGARVPAG
TATWILSTTVAGREYTTSVGGGDVAATDCYVPEWDVTTAVVPRNEAGQIRLTGTITNRTT
EAMRVDLRAAGRTSAPVTVAAGESATLVLDTQTRKLPAGVARFGLSRWVTDVDGDQPRAA
VEPEKPATVRYAAAVLAPAIGGEGQASYPGACVYDPASETSSRTVAITLDNRGSTLPVAF
TVGTAAVTVPAGETRTVEQRVVAGTAGLDVVADGRSLGTVPVQVASCATFAWPADVTAAA
QARCVPAGGPDSRPSVAVTVSDATGRSYEARTRLVRGTWTGPVAVPGGGSASLAVDPGSG
LRVRGGDVVVELARTIEGKRYTAEKTVGYDAVSCVVRDPGARLELGDVVVNQSGWWPTSS
RTVGVVLDNTASNVPVRFVVTGGPDGGTTQRTVRPGQAQTVDLGTVVGRTGASISVRTDG
WSTTLVVDPFTGTPGWCAPAWNGGTEARGGYTAGDVVSYGPTSYRYLGAAQPASGGNAGT
GSASPTGPATTPGTTGTAAGADAASSQTSQGTIDGADRSEERSDDGSAVTGRNGSVTGRD
GDRDTANTRWGGRWSGGGVSRSVGQAVPLFGSWVTPPPRSDVWQAAGACEWRWPGGAQTT
P |
|---|
| NT seq |
4326 nt +upstreamnt +downstreamnt
gtgacggacgtctacatcgagtcgggagatcagccctcgtcgcccagcgacgcggagctg
atccttgaggtgcgcgggggagatctcgacgcctatggcgcgctctacgcgcgccacgcg
ggtgccgcgcggcgcctcgcgcagtcgtacgtccgcaacgccgcggacgccgacgacgtc
gtcgccgacgcgttcgcgcgcgtgctgcgggtgctccagtccggtcgtgggccggaccag
atgttccgggcctacctgttcaccgtggtcaagaacgtcgccatcgaggtggccaagggc
catcgccgcatgcagcccaccgacgacgaggcgacgttcgagaccgccctgttctccgag
gtgtcgtcggaggacccgacgctcgcggggttcgagaagaccgtcgtctcgcgcgcctac
cgcaacctgcccgaacggtggcaggccgtgctctggtacacggaggtcgagggatacacc
ccggcacagatcgcacccgtcctcgggctcaccgcgaacggcgtctccgcgctcgcctac
cgtgcgcgcgaagggctgcgcgtcggctacctgcaggagcacctctcggggttcacggcc
gacggctgccgcaccgtcaacccgctgctcggcggatacgtgcgcggctcgctcgccagc
cgcgagatcgccaaggtcgacgcgcacctcaagacctgcggtgactgccgaaccctcgtg
ctggagctgtccgacgtcgcgcacggcatgcgcggggtgatcgcaccgctcgtcctcggt
ggtctcggcctcggcctggtgtccgcgctcccgctcggcgcgctcgtcggtgccggcgtg
acgagcgccgcgggggccgcagggggtgccggcgtcgtcggcggtgcggcgacgggcgcc
acggtgacagggtcgttcggtgcggccggttctgcggggacggccggtgccgccgcgggc
acggccggcgccgcgggcacggctggcgctacggccggagtcggagccggtgccgccgga
gcgaccggagccgcgaccggtgccgtggccggcactgccggcgccacgaccgccggagca
gccgcagcgtcgtcgggcgccgggtccatcgcggccggactcggtgccgccaccgcaagc
gtggcgacgtcggcaggatcggcggctgcggcgaccggcaccaccgccgtgacggccgcg
accaccgccgcgtcgtccaccgccgtcgcctccacgctcgccgcctcgaccgctggcgcc
gtcgtcggcacctcgagcgtggcggcagcggcgagcgccgtcgccgtggccgccgtcggc
gtcgtcaccgtgctccatgcgctcgcaccgtcgtcgggcgacatccccacgccgcaggcc
acctcgatcgtcacgaccctcccgggcctgcaggctccggccgagatcggccccgtcgag
cccacgccgcaggtgtcgccgtcgcagcttcccgcgttcgctcaggcgccggtcgtcgcc
ctggtggacccggccaagctcgcggtcgccccggtgagcaccgggacgctccagccgcgg
gtgccgcagcgggtgaagctcacggtcgccaacaccggtgagcagacggccgtcgggacc
accgtccgcttcgacctcgcggacggcctgtcgccggtcttcgcgtcgtcgacgggtgcc
aggggcgccccgatcgccgggctgccgctcgacgccgccgcgctgccgtgccgtccggcc
gacgacgacgccgacgtcgtctgccggctcggtgacgtgccgggcggttccacgacgacg
ttcgcgttcgacgtcgtcgcccgcaacggcgggacctacgacatcacgggccaggtgtgg
gcctccgggctgaagccgtccgccatcgccctggttcccgcggtcgtcgaccactacggg
gccgagctgaccgccgagctcgggacgctggacgacctcgcgaacccgggcgtcggcacc
ctgccggtctcggtcgtcaactcgggtgacgagcccgccgccgaaggctggtcggtggac
gtcaccctgccggacggcctgacgctcgcgggtgtcgagggcggcctggactgcacgacc
gacccgcaggccgccgggcacctgacctgtgtggccgcgaacccggcgacgctgcgcccg
ggagtcggggcgttcgcgtcgctgcgggtgctcgccccggcgaccccgaccaacggcacc
ctgacggctagggccatacctgtcgcggccgacggcggtcacgtcgtcgcgggcaccggt
gcgatcaacgtgcaggcgccctgggcaggggcggcaccgatcggggtcaccacgtggtgc
gccgcgacggggaaccttgcgacggccgacgtcgtcgtcgggggcacgttcgtgaacacg
acgtcgcagacggtgacggcgcggctcgaggccgccggctcggcggccgtcgggcgggcg
ctcgccccgggcgagagcgtccggctcgcgctgcacgacggtgcccgcgtgccggcgggg
acggcgacgtggatcctgagcacgacggtcgcgggccgcgagtacacgacctcggtcggg
ggcggcgacgtcgcggcgaccgactgctacgtcccggagtgggacgtgaccacggccgtc
gtaccgcgcaacgaggccggccagatccggctcacgggcacgatcacgaaccggaccacc
gaggcgatgcgggtcgacctgcgcgccgcgggccgcacgtcggcgcccgtgacggtcgcg
gccggcgagagcgccacgctcgtcctcgacacgcagacccgcaagcttccggcgggcgtc
gcgaggttcggcctgtcccgctgggtcaccgacgtggacggcgaccagccacgcgccgcc
gtcgagccggagaagcccgcaacggtgcgctacgccgccgcggtcctggcccccgccatc
ggcggggaggggcaggcctcgtacccgggcgcctgcgtctacgacccggcgagcgagacc
tcctcgcgcacggtcgcgatcaccctcgacaaccgcggctcgacgctcccggtggcgttc
accgtcgggacggccgcggtgacggtgcccgcgggcgagactcgcacggtcgagcagcgg
gtcgtcgccgggactgcgggcctcgacgtggtcgccgacggccgctcgctcggcacggtg
cccgtgcaggtggccagctgcgcgacgttcgcgtggcccgccgacgtcaccgccgccgcc
caggcgcgctgcgtcccggccggcggccccgacagcaggccgagcgtcgccgtcaccgtg
tccgacgcgacagggcggtcgtacgaggcgcgcacgcggctcgtgcgcggcacctggacc
gggccggtcgcggtccccggtggcggttcggccagcctcgccgtcgatcccggctccggc
ctgcgtgtccgcggcggtgacgtcgtcgtcgagctggcgcggacgatcgagggcaagcgg
tacaccgccgagaagacggtcggctacgacgcggtgagctgcgtcgtcagggatccgggc
gcgcggctggagctcggcgacgtcgtcgtcaaccagagcggctggtggccgacgtcgagc
cggacggtcggcgtcgtgctcgacaacacggcgtcgaacgtgccggtgcggttcgtcgtc
accggcgggccggacggcggcaccacgcaacgcacggtgcggccgggccaggcgcagacc
gtcgacctcggcacggtcgtgggccgtacgggcgcgagcatcagcgtgcggacggacggg
tggtcgacgacgctggttgtcgacccgttcaccggcacccccggctggtgcgcgcccgcg
tggaacggtggcaccgaggcccgcggcggctacacggcgggcgacgtcgtcagctacggc
ccgaccagctaccgctacctcggtgcggcgcagccggcgtccggggggaacgcgggcacc
gggtctgcttcacccacgggaccggccacgacgcccggcaccaccggcaccgccgcgggc
gccgacgccgccagcagccagacgtcgcagggcacgatcgacggtgcggaccgcagcgag
gaacgcagtgacgacggcagcgcggtcaccggtcgcaacggctccgtcaccggtcgtgac
ggcgaccgcgacacggccaacacccgttggggcggtcgctggtcgggcggcggcgtgtca
cgcagcgtggggcaggcggtcccgctgttcgggtcctgggtcaccccgccgccgcgcagc
gacgtgtggcaggccgcgggcgcgtgcgagtggcgctggccgggcggggctcagacgacg
ccgtag |
|---|
