Xylanimonas cellulosilytica: Xcel_0654
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Entry
Xcel_0654 CDS
T01135
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xce
Xylanimonas cellulosilytica
Pathway
xce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Xcel_0654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xce03021
]
Xcel_0654
03400 DNA repair and recombination proteins [BR:
xce03400
]
Xcel_0654
Enzymes [BR:
xce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Xcel_0654
Transcription machinery [BR:
xce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Xcel_0654
DNA repair and recombination proteins [BR:
xce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Xcel_0654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ACZ29693
UniProt:
D1BWW1
LinkDB
All DBs
Position
707522..708526
Genome browser
AA seq
334 aa
AA seq
DB search
MLIAQRPTLTEEVISENRTRFAIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEIILNIKNLVVSSENDEPVVMYLRKQGAGAVTAADIVPPAGVEVHN
PDLHIATLNDKGKLEIELTVERGRGYVSAAQNKSLDAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKPAITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPTD
SALAADLALPIEELNLTIRSYNCLKREGIHQVGELVARSEADLLDIRNFGAKSINEVKEK
LAELGLALKDSPLDFDPSASFYDGGDDTAYDEQY
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgcacagcgccccaccctgaccgaagaggtcatctcggagaaccgcacccgg
tttgccatcgagccgctggagccgggcttcggctacacgctcggcaactcgctgcgccgg
accctgctgtcgtccatcccgggcgcggccgtcacctccatccgcatcgacggtgtgctc
cacgagttcaccaccgtgccgggggtgaaggaggacgtcaccgagatcatcctcaacatc
aagaacctcgtggtctcctcggagaacgacgagccggtcgtcatgtacctgcgcaagcag
ggtgccggggctgtcaccgccgcggacatcgtcccgccggcgggcgtcgaggtgcacaac
cccgacctgcacatcgccacgctgaacgacaagggcaagctcgagatcgagctgaccgtc
gagcgtggccgtggctacgtctccgccgcccagaacaagtcgctggacgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtcctcaaggtcacgtacaaggtcgaggcc
acccgtgtggagcagcgcacggacttcgacaagctgatcgtcgacgtcgagacgaagccg
gccatcacgccgcgcgacgcgctcgcctccgccggcaagacgctcgtcgagctgttcggc
ctcgcccgcgagctgaacgtcgaggccgagggcatcgagatcggcccgtcgccgacggac
tccgcgctggccgcggacctggcgctgccgatcgaggagctcaacctcacgatccgctcg
tacaactgcctcaagcgcgagggcatccaccaggtcggtgagctcgtcgcgcgcagcgag
gcggacctgctcgacatccgtaacttcggtgcgaagtcgatcaacgaggtcaaggagaag
ctggccgagctcggcctggcgctcaaggactcgccgctcgacttcgacccgtccgcctcg
ttctacgacggcggcgacgacacggcgtacgacgagcagtactga
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