Xylanimonas cellulosilytica: Xcel_0688
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Entry
Xcel_0688 CDS
T01135
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xce
Xylanimonas cellulosilytica
Pathway
xce03030
DNA replication
xce03430
Mismatch repair
xce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Xcel_0688
03430 Mismatch repair
Xcel_0688
03440 Homologous recombination
Xcel_0688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xce03032
]
Xcel_0688
03400 DNA repair and recombination proteins [BR:
xce03400
]
Xcel_0688
Enzymes [BR:
xce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Xcel_0688
DNA replication proteins [BR:
xce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Xcel_0688
DNA repair and recombination proteins [BR:
xce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Xcel_0688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACZ29727
UniProt:
D1BXB7
LinkDB
All DBs
Position
complement(739385..740128)
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AA seq
247 aa
AA seq
DB search
MSEQQYDAFTAGWARGPLVGFDTETTGVDVANDRIVTAAVVLRIPGVSTDVRTWLVDPGV
EIPAEAAAIHGVTTEHARAHGVAPAVALEEIAAELAAHLREGVPVVAYNAAFDLSLLDAE
LARHGLATLPERLGRAVTPVLDPLVLDRWQDRYRRGKRRLGDLVTHYGVLTTEDLHAADV
DVLATLDVLDALVRTFPELGALGLEELHHAQVGAHDTWARSFNEWRARQGLDGPGASRAW
PVEHARR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagcagtacgacgccttcacggccggctgggcgcgtggcccgctggtgggg
ttcgacacggagaccaccggggtcgacgtcgcgaacgaccggatcgtgacggctgccgtg
gtgctgcgcatcccgggggtgagcaccgacgtgcgtacgtggctcgtcgatccgggggtg
gagatcccggccgaggccgccgcgatccacggtgtcaccacggagcacgcccgggcgcac
ggggtggcgccggccgtcgcgctggaggagatcgccgcggagctggccgcccatctgcgc
gagggcgtgccggtggtcgcgtacaacgccgcgttcgacctgtcgctgctcgacgcggag
ctggcccggcacggcctcgccacgctccccgagcggctgggccgcgccgtgaccccggtg
ctggacccgctggtgctcgaccgctggcaggaccgttaccgccgtggcaagcgccggctc
ggcgacctggtgacgcactacggcgtgctcacgacggaggacctgcacgcggccgacgtc
gacgtgctcgcgaccctcgacgtgctcgacgcgctggtgcgcaccttccccgagctcggg
gcgctcggcctggaggagctgcaccacgcgcaggtcggcgcgcacgacacctgggcgcgc
agcttcaacgagtggcgtgcgcgccaggggctcgacgggccgggcgcctcgcgggcgtgg
cccgtcgagcacgcccggcgctga
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integrated database retrieval system
