Xylanimonas cellulosilytica: Xcel_0780
Help
Entry
Xcel_0780 CDS
T01135
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xce
Xylanimonas cellulosilytica
Pathway
xce03420
Nucleotide excision repair
xce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Xcel_0780
03430 Mismatch repair
Xcel_0780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xce03400
]
Xcel_0780
Enzymes [BR:
xce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Xcel_0780
DNA repair and recombination proteins [BR:
xce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Xcel_0780
MMR (mismatch excision repair)
Other MMR factors
Xcel_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ACZ29818
UniProt:
D1BXK8
LinkDB
All DBs
Position
848566..852144
Genome browser
AA seq
1192 aa
AA seq
DB search
MSTPDENPRLDPHGSSAADAPFDDWAALGSTPGDSALSPARPDDAALLPAAPDDVAPRPV
LSAREIARLIGRHEPTDEQVAVIEAPLEPTLVVAGAGSGKTETMAARVVWLIANGLVEPE
QVLGLTFTRKAAGELQTRVTSRLAQLARARTRAGHGPASAADAAIDLLARPTIATYNAYA
ASLVTDHGLRLGVEPGSRLLGEANQWQLANQLVESWDEDLGTDRSVSGVVGGVIGLSGEL
GEHLVDVDDARAMLDAMIERLSALPLGPRQRTRGADNEKLLRSLAERRGLLDLVAEYRRR
KRAADALDFGDQIAFAAELARSVPYVGEVERARFRVVLLDEYQDTSYAQVELLAGLFGGG
HAVTAVGDPHQSIYGWRGASASGLARFPERFRHADGAPAGVRYLSTSWRNDAAVLAAANI
ASAPLRAELTTHVPPLDLRPGAGAGVVSAHVATTLEEEAEAAAEWVAERWRPGTHPHGRV
TAAVLCRKRSQFAAVEVALRRRGLPVEVVGLGGLLSTPEVVDVVALLEAVHDPSRGDSLL
RLLTGPRVNLGAADLHALGSRAADLAREDDPRRAAGRAHSDGDAPAAPDGGSGEADDLAV
VEGDVVDHRSLVDALDDLPQPGRAARDGRVLTPAGHTRLAALRSVLRSLRGLTYLSLPEL
VVQAERALGLDVEVATADAVATLVPDAGERVSRRGREHLDAFRDVAATFAQSADAATLGA
FLAWLGVAQKQERGLDLPVREPDPDAVQVITAHAAKGLEWDVVAVPGLVDGVFPTIAEAA
NGQRAESAWLTDVAALPYPLRGDDADLPAFRWEAAVDTKELDGLRGEFRAACGEHALAEE
RRLAYVAFTRARRELLLTAHWWGTSSTPRRLSPFLVELVEVGLVTADGWTAAPDAADSNP
RDDVEVTASWPAVDDVEVGSPRDVLRATAALVDAAATDRAAHAVAADGVLVDAAGHDIVE
LARILLAERDERSGHEVEMPAHVSASGLVRLATDRDEFALQLRRPVPAEPTVHARRGTRF
HEWVEQQFASSALFDVDDLPGADDGDLPGDADLDVLKEKFLVSEWADRTPIAVEQDVETP
LAGIMTRSRMDAVFADPDGEPGSVVVVDWKTGRPPTDTAARAAREVQLAVYRLAWSRWTG
LPLDKVSAAFCYVATGETVRPERLATEAELEALIRGVSESPDRARHGASAST
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgccggacgagaacccccggctcgacccgcacgggtcgtcggccgccgacgcg
cccttcgacgactgggccgccctcggcagcaccccgggcgacagcgcgctcagcccggcc
cggcccgacgacgcggcgctgctcccggcggcacccgacgacgtcgccccgcgacccgtc
ctctccgcacgcgagatcgcgcggctcatcggccgccacgagccgacggacgagcaggtc
gccgtcatcgaggccccgctcgagccgacgctcgtggtggccggcgcaggctcgggcaag
acggagaccatggccgcgcgcgtcgtgtggctcatcgccaacggcctggtggagcccgag
caggtgctcggcctgacgttcacgcgcaaggcggcgggggagctgcagacgcgcgtcacc
tcgcggctcgcgcagctcgcgcgtgctcgtacccgcgcggggcacggtcccgcctcggcc
gccgacgccgccatcgacctcctggcccgccccacgatcgccacgtacaacgcctacgcg
gcctcgctggtcaccgaccacggcctgcgcctgggcgtcgagccgggctcgcgcctgctg
ggcgaggcgaaccagtggcagctcgcgaaccagctcgtcgagtcctgggacgaggatctg
ggcacggaccggtcggtgtccggcgtcgtcggcggggtcatcgggctctccggggagctc
ggggagcacctcgtcgacgtcgacgacgcccgcgcgatgctcgacgcgatgatcgagcgg
ctgtcggcgctgccgctgggcccgaggcagcgcacccgcggggccgacaacgagaagctg
ttgcggagtctggccgaacgccggggactgctggacctggtcgcggagtaccgccggcgg
aagcgggccgccgacgccctcgacttcggcgaccagatcgccttcgccgccgagctggcc
cgctcggtgccgtacgtcggtgaggtggagcgcgcccggttccgcgtggtgctgctcgac
gagtaccaggacacgtcgtacgcgcaggtcgagctgcttgccggcctgttcggcggcggt
catgctgtgacggcggtcggtgacccgcaccagtcgatctacggctggcggggcgcgtcg
gcgtcgggcctcgcgcggttcccggaacgcttccggcacgccgacggcgccccggcgggt
gtgcgctacctgtcgacgtcgtggcgcaacgacgccgccgtgctggccgccgcgaacatc
gcctcggcgccgctgcgcgcggagctgaccacgcacgtcccgccgctggacctgcggccg
ggcgccggcgccggcgtcgtcagcgcgcacgtggcgacgacgctcgaggaggaggccgag
gccgctgcggagtgggtcgccgagcgctggcgacccggaacgcacccccacgggcgcgtc
acggcagcggtgctgtgccgcaagcggtcgcagttcgcggccgtcgaggtggctctgcgc
cgccgcggcctgcccgtcgaggtcgtgggtctgggcggcctgctgtccacacccgaggtg
gtcgacgtcgtcgcgctgctcgaagcggtgcacgacccgtcgcgcggcgactcgctgctg
cgcctgctcaccggtccgcgcgtcaacctcggcgccgccgacctgcacgcgctgggctcg
cgggccgccgacctcgcccgggaggacgacccacggcgcgcggcgggccgggcgcactcc
gacggtgacgcacccgccgcgccggacggcggttccggtgaggccgatgacctcgccgtc
gtcgagggtgacgtcgtcgaccaccgctccctcgtcgacgccctcgacgacctcccccag
cccggccgcgccgcacgcgacggaagggtgctcaccccggcgggacatacgcgcctcgca
gcgctgcggtccgtgctgcgcagcctgcgcggcctgacctacctgtccctgcccgagctc
gtggtccaggccgaacgggcgctcggcctggacgtcgaggtcgccaccgccgacgccgtc
gcgaccttggtcccggacgcgggggagcgggtcagccggcgtgggcgcgagcacctcgac
gcgttccgcgacgtcgccgccacgttcgcgcagtccgcggatgctgccacgctgggtgcg
ttcctcgcctggctgggcgtggcccagaagcaggaacgcggcctcgacctgcccgtgcgc
gagcctgacccggacgccgtccaggtcatcaccgcgcacgccgccaagggcctggaatgg
gacgtcgtggccgtgcccggcctggtcgacggcgtgttccccacgatcgccgaggcggcg
aacgggcagcgggccgagagcgcgtggctgaccgacgtcgccgccctgccgtacccgctg
cgcggcgacgacgccgaccttccggcgttccgctgggaggcggccgtcgacacgaaggag
ctggacgggctgcgcggcgagttccgcgccgcctgcggggagcacgccctcgccgaggag
cggcggctcgcgtacgtcgccttcacgcgcgcccggcgcgagctcttgctgaccgcccac
tggtggggcacgtcctccacgccacgtcggctctcaccgttcctcgtcgagctggtcgag
gtgggactggtcaccgcggacggttggacggctgcaccggacgccgcggacagcaacccg
cgcgacgacgtcgaggtcaccgcctcctggccggccgtcgacgacgtcgaggtcggctcg
ccacgcgacgtcctgcgggcgaccgcggccttggtcgacgccgccgcgacggatcgggcg
gcgcacgccgttgctgccgacggcgtgctggtcgacgccgccgggcacgacatcgtggag
ctggcccgcatcctgctcgccgagcgggacgagcgttcgggccacgaggtcgagatgccg
gcgcacgtctccgcctccgggctggtgcggctggcgaccgaccgcgacgagttcgccctg
caactgcgtcgcccggtcccggccgagcccaccgtgcacgcccgccgcggcacgcgcttc
cacgagtgggtcgagcagcagttcgcgtcgtcggccctgttcgacgtcgacgacctgccc
ggcgccgacgacggagacctgcccggtgacgcggacctcgacgtgctcaaggagaagttc
ctggtgagcgagtgggcggatcgcaccccgatcgccgtcgagcaggacgtcgagacgccg
ctcgccgggatcatgacgcgctcccggatggacgccgtcttcgcggaccccgacggagaa
cccggctccgtggtcgtcgtcgactggaagacgggtcgtccacccaccgacacggctgcc
cgcgcggcccgagaggtgcagctcgccgtctaccgcctcgcgtggtcgcgctggacgggc
ctgccgctcgacaaggtcagcgcggcgttctgctacgtggcgaccggcgagacggtacgc
ccggagcggctcgccacggaggcagagctggaggccctgatccgcggtgtatcggagtct
cctgaccgtgcccggcacggtgcctcggccagcacgtga
DBGET
integrated database retrieval system
