Xylanimonas cellulosilytica: Xcel_1096
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Entry
Xcel_1096 CDS
T01135
Name
(GenBank) putative viral-like DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xce
Xylanimonas cellulosilytica
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xce03032
]
Xcel_1096
03400 DNA repair and recombination proteins [BR:
xce03400
]
Xcel_1096
Enzymes [BR:
xce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Xcel_1096
DNA replication proteins [BR:
xce03032
]
Prokaryotic type
DNA Topoisomerases
Xcel_1096
DNA repair and recombination proteins [BR:
xce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Xcel_1096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
fvmX3
Motif
Other DBs
NCBI-ProteinID:
ACZ30127
UniProt:
D1BZH3
LinkDB
All DBs
Position
complement(1179413..1180393)
Genome browser
AA seq
326 aa
AA seq
DB search
MPRLRRVSASAPGFGRRRAGRGWVYLDVDGVPLRDEAALARCRRLAIPPAWREVWICRYP
DGHLQAFGRDDAGRGQYLYHEEWTQRRRRRKHDHVLEVAARLPAARRRVARALAEPGLGP
LRVAALAFRLLDLAYFRAGGEIYATKHRSFGLATIRKEHVVVGAEGTVRFRYPAKSGQIR
EVEVDDPVVAELVAAMKRRRGGTDLLAWRNGDGSWHDVTSADVQAAVKEQLGPEATPKDF
RTWHATVLAARALADAGLPPRSDRARRHVVAGVVRDVAEELGNTPAVARASYIDPRLVDL
WEHGETIGPTRTHAAAERAVLRLLGG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctgcgtcgtgtgtccgcctcggcccccgggttcgggcggcggcgtgcgggg
cgcggctgggtgtatctcgacgtcgacggcgtgccgttgcgggacgaggccgcgctcgcc
cgctgccgtcggctggcgatcccgcccgcgtggcgcgaggtgtggatctgccggtacccg
gacggtcacctgcaggcgttcggccgtgacgacgccggacgcggccagtacctgtaccac
gaggagtggacgcagcgacgacgacgacgcaagcacgaccacgtgctggaggttgcggcg
cggttgcctgcggcccggcgccgcgtggcccgggcgctcgccgagccgggcctcggccct
ctgagggtggcggcgctggccttccggctgctcgacctggcgtacttccgtgcgggcggc
gagatctacgcgacgaagcaccgcagcttcggcctggcgaccatccgcaaggagcacgtg
gtcgtgggtgcggaagggaccgtccgcttccggtacccggccaagagcggccagatccgc
gaggtcgaggtcgacgatcccgtggtggccgagctggtcgctgcgatgaagcgtcggcgg
ggcggcacggacctgctcgcgtggcgcaacggcgacgggtcgtggcacgacgtcacgagc
gcggacgtgcaggccgccgtcaaggagcagctcggcccggaggcgacgcccaaggacttc
cgcacctggcacgcgacggtgctcgcggcgcgcgcgctcgcggacgcgggactgccgccg
cgctcggaccgcgcacgccggcacgtggtggccggtgtggtgcgcgacgtcgccgaggag
ctcggcaacaccccggcggtggcgcgggcgtcgtacatcgacccgcggctggtggacctg
tgggagcacggcgagacgatcggcccgacccgcacccacgcggcggcggagcgcgcggtg
ctgcggctgctgggtgggtga
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