Xylanimonas cellulosilytica: Xcel_1213
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Entry
Xcel_1213 CDS
T01135
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xce
Xylanimonas cellulosilytica
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xce03016
]
Xcel_1213
Enzymes [BR:
xce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Xcel_1213
Transfer RNA biogenesis [BR:
xce03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Xcel_1213
Prokaryotic type
Xcel_1213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ACZ30244
UniProt:
D1C055
LinkDB
All DBs
Position
1317866..1318843
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AA seq
325 aa
AA seq
DB search
MPVGVDGGTERPARRPRRPTAQDGFVIVDKPAGWTSHDVVGKVRWLAGTRKVGHAGTLDP
MATGVLVVGIGRATRLLTYVVGADKAYDATIRLGVGTTTDDAEGEVVATPGFTGTADDDA
LRAAVADLTGDILQVPTTVSAIKVDGKRAYALARAGQEVELKARPVTVRELTVRAARATS
AAGTPVLDLDVTAVVTSGTYVRALARDLGAALGTAGHLTALRRTRVGGHTLDDARTLDDM
AAQADADGTLATIPMAQAAAAHLPVRELTDDETRDLGFGRWVAPTGRPGTVAGVAPDGTL
TALLEDTRRQGQPLAKPVLVLTPAP
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtgggcgtggacgggggcacggaacgcccggcgcgtcggccccggcgccccacg
gcccaggacggcttcgtgatcgtcgacaagcccgcgggctggacgagtcacgacgtcgtc
ggcaaggtgcggtggctcgcgggcacccgcaaggtcggtcacgcagggacgctcgacccg
atggccacgggcgtgctcgtcgtcggcatcggacgagccacccgcctgctcacctacgtc
gtcggcgccgacaaggcgtacgacgcgacgatccggctcggcgtcggcaccacgaccgac
gacgccgagggtgaggtcgtggccacgcccgggttcaccgggacggcggacgacgacgcc
ctgcgggccgcggtcgcggacctgaccggcgacatcctccaggtccccaccaccgtctcg
gcgatcaaggtcgacgggaagcgcgcctacgccctcgcgcgggccggccaggaggtcgag
ctcaaggcgcgcccggtcaccgtccgcgagctcacggtccgcgccgcccgggcgacgtcc
gccgcgggcacccctgtcctcgacctcgacgtcaccgccgtcgtcacctccggcacctac
gtgcgcgccctcgcgcgcgacctgggcgccgcgctcggcaccgccggacacctcaccgcg
ctgcggcgcacgcgcgtcggcgggcacacgctcgacgacgcccgcacgctcgacgacatg
gccgcgcaggccgacgccgacggcacgctcgccaccatcccgatggcgcaggccgccgcc
gctcacctgccggtgcgcgagctcaccgacgacgagacccgtgacctgggcttcggtcgc
tgggtcgccccgacaggtcggcccggaacggtggcgggcgtggcacccgacgggaccctg
acggccctcctggaggacacccgccgccagggccaacccctggccaagccggtcctggtc
ctcaccccggccccctga
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