Xylanimonas cellulosilytica: Xcel_1230
Help
Entry
Xcel_1230 CDS
T01135
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
xce
Xylanimonas cellulosilytica
Pathway
xce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Xcel_1230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xce03019
]
Xcel_1230
Messenger RNA biogenesis [BR:
xce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Xcel_1230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ACZ30261
UniProt:
D1C072
LinkDB
All DBs
Position
1335346..1337031
Genome browser
AA seq
561 aa
AA seq
DB search
MSHPHPELTLPPALPAGGLRIVALGGLGEVGRNMAVLEYDGRLLIIDCGVLFPEDNQPGV
DLILPDFDYIRDRLDDVEAVVLTHGHEDHIGAVPYLLRLRRDIPLLGSQLTLAFVEAKLK
EHRISPVTLAVKEGQTEKLGPFDLEFVAVNHSIPDALAVAVTTPAGTVLHTGDFKMDQLP
LDGRVTDLRAFARLGEKGVDLFMVDSTNAEVPGFVTPEVEIGPVLDSVFAQAEKRIIVAS
FASHVHRVQQVLNAAHSHGRRVALVGRSMVRNMAIAADLGYLRVPEGVLIDLKKTGDLPD
DQIVYMSTGSQGEPMAALSRMSNGDHQVRISHGDTVILASSLIPGNENSVFRVINGLTRL
GARVVHSGNAKVHVSGHASAGELLYCYNILRPKNVMPVHGEVRHLVANGALAVKTGVPPE
RVVLAEDGVVIDLVDGKAAVVGAVPCGYVYVDGSSVGEITEAELKDRRILGEEGFVSVFA
VVDSATGKVLAGPQILARGMAEDAAVFDEIRPELVRALEDAITGGATDTYQLQQVMRRIV
GQWVSRRLRRRPMIVPIVVEA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgagccacccgcaccccgagctgaccctgccccccgccctcccggcgggcggcctgcgc
atcgtcgccctcggcggcctcggcgaggtcggccgcaacatggccgtgctggagtacgac
ggacgcctgctcatcatcgactgcggcgtcctcttccccgaggacaaccagccgggcgtc
gacctgatcctgccggacttcgactacatccgggaccggctcgacgacgtcgaagccgtc
gtcctgacccacggccacgaggaccacatcggcgccgtgccctacctgctgcgcctgcgc
cgcgacatcccgctgctgggctcccagctcaccctcgcgttcgtcgaggccaagctcaag
gagcaccgcatctcgcccgtgaccctcgcggtcaaggaggggcagacggagaagctcgga
ccgttcgacctcgagttcgtcgccgtcaaccactccatccccgacgcgctcgccgtcgcc
gtgacgacacccgccggcaccgtgctgcacaccggcgacttcaagatggaccagctcccc
ctcgacgggcgggtcaccgacctgcgcgccttcgcccggctcggggagaagggcgtcgac
ctgttcatggtcgactcgacgaacgccgaggtgcccgggttcgtcacccccgaggtcgag
atcggccccgtgctcgacagcgtgttcgcccaggccgagaagcgcatcatcgtcgcctcg
ttcgcctcccacgtgcaccgcgtccagcaggtgctcaacgcggcccactcgcacggccgc
cgcgtcgcgctggtcgggcgctcgatggtgcgcaacatggccatcgccgccgacctcggg
tacctccgcgtgcccgaaggggtgctcatcgacctgaagaagacgggcgacctgcccgac
gaccagatcgtctacatgagcaccggcagccagggcgagccgatggccgcgctgagccgc
atgtccaacggcgaccaccaggtccggatcagccacggcgacaccgtgatcctcgcgtcc
tcgctcatccccggcaacgagaactcggtgttccgcgtcatcaacggcctcacccgcctc
ggcgcccgcgtggtccactcgggcaacgcgaaggtgcacgtctccgggcacgccagcgcc
ggcgagctcctgtactgctacaacatcctgcggcccaagaacgtcatgcccgtgcacggc
gaggtgcgccacctcgtcgccaacggggcgctcgcggtgaagaccggcgtgccaccggag
cgggtcgtgctggccgaggacggggtcgtcatcgacctcgtcgacggcaaggcggcggtc
gtgggcgcagtgccgtgcggctacgtgtacgtggacggctcgtccgtgggcgagatcacc
gaggccgagctcaaggaccgccgcatcctcggcgaggagggcttcgtgtccgtcttcgcc
gtcgtcgactccgcgacgggcaaggtgctcgcaggcccgcagatcctggcccgcggcatg
gccgaggacgccgcggtgttcgacgagatccggcccgagctcgtgcgcgccctcgaggac
gcgatcaccggcggcgccaccgacacctaccagctccagcaggtcatgcgccgcatcgtc
gggcagtgggtcagccggcggctgcgccgccgcccgatgatcgtgccgatcgtcgtcgaa
gcctga
DBGET
integrated database retrieval system