Xylanimonas cellulosilytica: Xcel_1509
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Entry
Xcel_1509 CDS
T01135
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xce
Xylanimonas cellulosilytica
Pathway
xce03030
DNA replication
xce03410
Base excision repair
xce03420
Nucleotide excision repair
xce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Xcel_1509
03410 Base excision repair
Xcel_1509
03420 Nucleotide excision repair
Xcel_1509
03440 Homologous recombination
Xcel_1509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xce03032
]
Xcel_1509
03400 DNA repair and recombination proteins [BR:
xce03400
]
Xcel_1509
Enzymes [BR:
xce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Xcel_1509
DNA replication proteins [BR:
xce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Xcel_1509
DNA repair and recombination proteins [BR:
xce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Xcel_1509
NER (nucleotide excision repair)
GGR (global genome repair) factors
Xcel_1509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ACZ30539
UniProt:
D1BS47
LinkDB
All DBs
Position
1639089..1641806
Genome browser
AA seq
905 aa
AA seq
DB search
MTITAPNGHPGTGTGRPRLLLIDGHSMAYRAFYALPDTMATTSGQVTNAVYGFTSMLTKL
LGDEQPTHLAVAFDVSRRSFRTERYAEYKGTRSETPPPFKGQVPLIKDVLEALRVPTLER
EGFEADDIIATLAGQASAAGMEVLVCSGDRDSIQLVDADVTLLYPVRGVSEMARFTPETV
AEKYGVPPEQYPDLAALVGESSDNLPGVPGVGPKTAAKWVTQFGGLEPLLAGVGELKGKA
AENLRAAVDQVRLNRELNALLRDVVLEYGPDDLVLRGFDREAVHRIADALQFGVLRDRLL
AVDPAAADDAAATSPDAGFDLDVLDLPAGGLGDWLASRAGRTVGVDVAGRGTPAQGDAWG
IALAAGGQGVAYDLADITPDDEQALATWLADPTAPKVLHGAKTAWHALAARGIGLDGVVF
DTELAAYLCYPDQRGYDLGDLVARHLGRELKVGDDDAQGALDLDLGGAGTQGVREATRAA
AVADLAQALAGQLDDRGAASLLTDVELPLSAVLARVEATGIATDTAYLTGLERGFADQVA
QAAAEAYDAIGHEVNLGSPKQLQEVLFGELDMPKTKKTKTGYTTDAAALAELYAKTGHPF
LEHLLAHRDAAKLRVTVEGLLKSVHPDGRIHTTFQQTIAATGRLSSTEPNLQNIPIRTEA
GRQIRRAFRVGEGFESLLTADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHRYVGSRVFGV
EPAGVTAEMRSKVKAMSYGLAYGLSAFGLSQQLGIATGEAQGLMDDYFARFGGVREYLDG
VVEEARATGYTATVLGRRRYLPDLTSDNRQRRQMAERMALNAPIQGSAADIIKLAMLGVQ
RELDARGLRSRLLLQVHDELVVEVAPGEREAAEDVLRTQMGAAYTLDVPLDVSVGSGETW
HDAGH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatcaccgcgccaaacgggcaccctgggacgggcacgggccgacctcgcctcctc
ctcatcgacggccactcgatggcgtaccgggccttctacgccctgcccgacacgatggcg
acgacgtcgggccaggtgaccaacgcggtctacgggttcacctcgatgctcaccaagctg
ctgggcgacgagcagcccacccacctcgcggttgcgttcgacgtgtcgcggcggtcgttc
cgtaccgagcgctacgccgagtacaagggcacccgctccgagacgccgccgcccttcaag
ggccaggtgccgctcatcaaggacgtgctcgaggcgctgcgcgtgcccacgctggagcgt
gagggcttcgaggcggacgacatcatcgccaccctggccgggcaggcgtccgccgcgggc
atggaggtgctcgtctgctcgggcgaccgcgactccatccagctcgtcgacgccgacgtg
acgctgctgtacccggtccgcggggtctccgagatggcgcgcttcacccccgagacggtg
gccgagaagtacggcgtgccgcccgagcagtacccggacctcgccgcgctcgtgggggag
agcagcgacaacctgcccggcgtgccgggcgtcgggccgaagacggccgccaagtgggtg
acccagttcgggggcctcgaaccgctgctggcgggcgtcggggagctcaagggcaaggcg
gccgagaacctgcgcgcggccgtcgaccaggtgcggctcaaccgggagctgaacgccctc
ctgcgcgacgtcgtgctcgagtacgggccggacgacctcgtgctgcgcggcttcgatcgg
gaggccgtgcaccgcatcgccgacgcgctccagttcggcgtgctgcgcgaccggctgctc
gccgtcgaccccgcggccgcggacgacgccgcggcgacatcacccgacgcgggcttcgac
ctcgacgtcctcgacctgcccgcaggcgggctcggcgactggctcgcctcccgcgccggg
cgcaccgtcggcgtcgacgtcgccgggcgcggcacccccgcgcagggcgacgcctggggc
atcgcgctcgccgcgggcggccagggcgtcgcgtacgacctcgccgacatcacccccgac
gacgagcaggcgctcgcgacgtggctcgccgacccgacggcacccaaggtgctgcacggc
gccaagacggcctggcacgcgctcgccgcccgcggcatcggcctcgacggcgtcgtcttc
gacaccgagctcgccgcctacctgtgctaccccgaccagcgcggctacgacctgggcgac
ctcgtcgcccggcacctgggccgcgagctcaaggtgggcgacgacgacgcgcagggcgcc
ctcgacctcgacctgggcggcgccggcacgcagggggtgcgcgaggccacccgcgcggcc
gccgtcgccgacctggcccaggcgctggccgggcagctcgacgaccgcggggcggcctcg
ctgctcaccgacgtcgagctgccgctgtccgccgtgctggcgcgggtggaagccaccggc
atcgcgacggacaccgcgtacctcaccgggctcgaacgcggcttcgcggaccaggtcgcc
caggccgcggccgaggcgtacgacgccatcgggcacgaggtgaacctcggctcgcccaag
cagctccaggaggtgctgttcggcgagctcgacatgcccaagacgaagaagaccaagacg
gggtacacgaccgacgcggcggcgctcgcggagctgtacgccaagacgggccacccgttc
ctggagcacctgctcgcgcaccgtgacgcggccaagctccgcgtgacggtcgagggcctg
ctcaagtcggtgcacccggacgggcgcatccacacgaccttccagcagaccatcgccgcg
acggggcgcctcagctccaccgagcccaacctgcagaacatccccatccgcaccgaggcg
gggcggcagatccggcgcgcgttccgcgtgggcgaggggttcgagtccctgctgaccgcg
gactactcgcagatcgagatgcgcatcatggcgcacctgtcgggggacgagggcctcatc
gaggcgttccgcacgggtgaggacctgcaccggtacgtgggctcgcgcgtcttcggcgtc
gagccggcgggggtgaccgccgagatgcgatcgaaggtcaaggcgatgtcctacggcctg
gcgtacgggctctcggcgttcgggctcagccagcagctcggtatcgccacgggcgaggcg
cagggcctcatggacgactacttcgcccggttcggcggcgtgcgcgagtacctggacggc
gtcgtcgaggaggctcgcgcgacggggtacacggccacggtgctgggccggcgccggtac
ctgccggatctcacgagcgacaaccgccagcgccgtcagatggccgagcgcatggcgctc
aacgcccccatccagggcagcgcggccgacatcatcaagctcgccatgctgggcgtgcag
cgggagctggacgcgcgcgggctacgctcgcgcctgctgctccaggtgcacgacgagctc
gtcgtcgaggtcgccccgggggagcgtgaggcggccgaggacgtgctgcgcacccagatg
ggcgccgcgtacacgctggacgtgccgctcgacgtatccgtgggatcgggggagacatgg
cacgacgcgggacactga
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integrated database retrieval system
