Xylanimonas cellulosilytica: Xcel_1733
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Entry
Xcel_1733 CDS
T01135
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xce
Xylanimonas cellulosilytica
Pathway
xce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Xcel_1733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xce03019
]
Xcel_1733
03009 Ribosome biogenesis [BR:
xce03009
]
Xcel_1733
Enzymes [BR:
xce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Xcel_1733
Messenger RNA biogenesis [BR:
xce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Xcel_1733
Ribosome biogenesis [BR:
xce03009
]
Prokaryotic type
rRNA helicases
Xcel_1733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
FKRP_N
Motif
Other DBs
NCBI-ProteinID:
ACZ30756
UniProt:
D1BSR4
LinkDB
All DBs
Position
complement(1875457..1877595)
Genome browser
AA seq
712 aa
AA seq
DB search
MSRELRPPVLSDGQDSRSLNGSVLFMPTTPDVVVPTEAPVAPIETPVEPGFDTLGLPATL
EAAVADLGFTTPSAIQAQAIPALLGGRDITGVAQTGTGKTAAFGLPLLASVEAHRGTRPT
VQALVLTPTRELAMQVAEAIESFASHLPDVRVLSVYGGSPYVPQQRALRDGVHVVVGTPG
RVIDHLERGGLVLDDARFLVLDEADEMLRMGFAEDVEKIFSYAPTQRQVALFSATMPPAI
RAIADTHLNDPVEIAVARQSSTVASVHQGYAIVPFRHKVGALTRILATSDADASIVFTRT
RSAAEEVGAALIEKGISAATISGDVAQKEREKIVERLRSGALDVLVATDVAARGLDVDRI
GLVVNFDIPREAEAYVHRIGRTGRAGRTGRAVSFVTPHERGKLKFIENTIKVSLEEIDIP
SPRDVSAHRAARLLDSAPARTQAGRLDLYKQLVRNLVTTGDGEEAGVVDPTKAVDLAATL
LALAVGDDGPRARAEQEEYEREQAEGRAARQARETRKHEIGDRGARGDRFGDRDRRPARD
GDDRSHTRGIRRPAAGTRYRVAVGHKDGVNPGGIVGAITGEGGLTGADVGKIDIFGSFSL
VDITAPLDGAQLDRLSRARVAGRALRLTVDRGAPEGTRSYDRPARAERFDRSDRPVRSDR
YERGDASDRPARSDRFERADRPARTDRYERSDRPVRTGGPDRNDRAARKPRW
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccgggagctgcgaccgcccgtcctcagcgacgggcaggactcccgctccctgaac
ggatcggtgcttttcatgcccaccacccctgacgtcgtcgtgcccaccgaggcccccgtc
gcacccatcgagacccccgtcgagcccggcttcgacaccctcggcctgcccgccaccctc
gaagccgccgtcgccgacctcggcttcaccactccctccgccatccaggcccaggccatc
ccggccctcctcggcggccgtgacatcaccggcgtcgcccagaccggcaccggcaagacc
gccgcgttcggcctccccctcctcgcctccgtcgaagcccaccgcggcacccggcccacc
gtccaggccctcgtcctgacgcccacccgcgagctcgccatgcaggtcgccgaagccatc
gagtccttcgcgtcccacctgcccgacgtccgcgtcctgtccgtctacggcggctccccg
tacgtgccccagcagcgcgccctgcgcgacggcgtccacgtcgtcgtcggcacccccgga
cgcgtcatcgaccacctcgagcgcggcgggctcgtcctcgacgacgcccggttcctcgtc
ctcgacgaggccgacgagatgctccgcatgggcttcgccgaagacgtcgagaagatcttc
tcgtacgcccccacccagcgacaggtcgccctcttctccgcgaccatgccccccgccatc
cgggccatcgccgacacccacctcaacgaccccgtcgagatcgccgtcgcccgccagtcg
tccaccgtcgcctccgtgcaccagggctacgcgatcgtccccttccgccacaaggtcggg
gcactgacccgcatcctcgccacctccgacgccgacgcctccatcgtcttcacccgcacc
cgctccgccgccgaagaagtcggcgccgccctcatcgagaagggcatctccgccgccacc
atctccggcgacgtcgcccagaaggaacgcgagaagatcgtcgagcgcctccgctccggc
gccctcgacgtgctcgtcgccaccgacgtcgccgcccgcggcctcgacgtcgaccgcatc
ggcctcgtcgtcaacttcgacatcccccgcgaagccgaggcctacgtccaccgcatcggc
cgcaccggccgcgccggccgcaccggccgcgccgtctccttcgtcaccccccacgagcgc
ggcaagctcaagttcatcgagaacaccatcaaggtctccctcgaagagatcgacatcccc
tccccccgcgacgtctccgcacaccgcgccgcccgcctcctcgacagcgcccccgcccgc
acccaggccggccgcctcgacctctacaagcagctcgtccgcaacctcgtcaccaccggc
gacggcgaagaggccggcgtcgtcgaccccaccaaggccgtcgacctcgccgccaccctc
ctcgccctcgccgtcggcgacgacggcccccgcgcccgcgccgagcaggaggagtacgag
cgcgagcaggccgaaggccgcgccgcacgccaggcccgcgagacccgcaagcacgagatc
ggcgaccgcggcgctcgcggtgaccggttcggcgaccgcgaccgccgcccggcacgcgac
ggcgacgaccggtcccacacgcgcggcatccgccgtccggccgcggggacgcgctaccgc
gtcgccgtcgggcacaaggacggggtgaacccgggcggcatcgtcggtgccatcaccggc
gaaggcggcctgaccggtgccgacgtcggcaagatcgacatcttcggctcgttctcgctc
gtcgacatcacggccccgctcgacggcgcccagctcgaccggctgtcgcgcgcccgcgtc
gcgggccgtgcgctgcgcctgacggtcgaccgcggcgcccccgagggcacccggtcctac
gaccgtccggcccgtgccgagcgcttcgaccgctcggaccgcccggtccgcagcgaccgg
tacgagcgcggcgacgcgtcggaccggcccgcccgttccgaccggttcgagcgtgccgac
cgcccggcccgcaccgaccggtacgagcgctctgaccgccccgtgcggaccggcggcccg
gaccgcaacgaccgtgcggcgcgcaagccgcgctggtaa
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