Xylanimonas cellulosilytica: Xcel_1777
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Entry
Xcel_1777 CDS
T01135
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
xce
Xylanimonas cellulosilytica
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xce03019
]
Xcel_1777
Enzymes [BR:
xce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Xcel_1777
Messenger RNA biogenesis [BR:
xce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Xcel_1777
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACZ30797
UniProt:
D1BSV5
LinkDB
All DBs
Position
complement(1912885..1915830)
Genome browser
AA seq
981 aa
AA seq
DB search
MSTADGSTEPGVLSPAERYAASRARTARSQVGSGTRLAEFRSELGFELDDFQVAACQALE
DGRGVLVAAPTGAGKTVVGEFAVHLALAQGGKAFYTTPIKALSNQKYADLVRRHGVENVG
LLTGDTTINGEAPVVVMTTEVLRNMLYAGSRTLEGLAFVVMDEVHYLADRFRGPVWEEVI
IHLADHVQLVSLSATVSNAEEFGDWLEMVRGDTAVVVSERRPVPLWQHVVVSAREPRGTP
RLYDLYAGHVDPTDPGVNPPINPELHDVFRTSGRRADDDGRSGNGRRGSGQRGPGDRGYR
GRGGYRPGVAGLAPQRRTPPRFAVVDALDADALLPAIYFIFSRAGCEGAVQQCLTAGLRL
TSPQEEAEIRRLVEQRTATIPPEDLDVLGYWSWLQALARGIAAHHAGLLPVFKETVEDLF
ARGLVKVVFATETLALGINMPARSVVLEKLVKWDGTAHQPVTPGEYTQLTGRAGRRGIDV
EGHAVVVDHTGLDPVALAGLASRRTYPLRSSFRPTYNMAVNLVSQVGHDRAREVLETSFA
QFQADRGVVGLAKQAQAHAEALDGYAQAMACDRGDFAQYMAIRRQISDREKELSRAASGA
RRAEAVASFENLKRGDVVEVPSGRRRGFVLVLDPGHDDRSFDGPRPTVLTQEKQVKKLTL
ADAPGGVTVVTRVKIPKAFNPRRPDARRDLASTMRNALGAFRDDAGTRSHGAARPGRGPG
RRSDAASDKELASLRSRLRAHPCHSCPDRDDHARWAERHDQLAGEHRRLVQRIEGRTGSV
ARIFDKTCTVLETLRYLDRSDDAGSDGRGELQVTADGAWLRRVYAENDLLLAECLRRGTW
DGLDAPGLAAAVSTVVYSGRREDAAEPYVPGGPHGRLAQALDATVRVWSEVTDLEELHGL
DATGPLDLGIVAPVHRWAGGKGLDAVLRGTDLAAGDFVRWCKQVVDVLDQLAQAAPTPAL
RATARKAQHAVLRGVVAYSSV
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgccgacggcagcaccgaaccaggcgtcctgagccccgccgagcggtacgcc
gcctcccgggcccgcaccgcccgctcccaggtcgggtcggggacccggctcgcggagttc
cgcagcgagctcgggttcgagctcgacgacttccaggtggccgcctgccaggccctcgag
gacgggcgcggcgtgctggtggccgccccgaccggtgccggcaagacggtcgtgggggag
ttcgccgtccacctggccctcgcgcagggcggcaaggcgttctacaccacccccatcaag
gcgctgtcgaaccagaagtacgccgacctggtccgccggcacggtgtggagaacgtcggc
ctgctcaccggggacaccaccatcaacggtgaggcacccgtcgtggtcatgaccaccgag
gtgctgcgcaacatgctctacgcgggctcgcgcaccctcgaaggcctcgcgttcgtcgtc
atggacgaggtgcactacctcgccgaccggttccgcgggcccgtgtgggaagaggtgatc
atccacctcgccgaccacgtccagctcgtgtccctgtccgccaccgtgtccaacgcggag
gagttcggcgactggctcgagatggtgcgcggcgacaccgccgtcgtcgtctccgagcgg
cgacccgtgccgctgtggcagcacgtcgtcgtctcggcccgcgaaccgcgcggcacaccg
cgcctgtacgacctgtacgccgggcacgtcgaccccaccgaccccggcgtcaacccgccc
atcaaccccgagctgcacgacgtgttccgtacctccgggcggcgggccgacgacgacggg
cgctcgggcaacgggcgacgcgggtccggccagcggggccccggcgaccgcgggtaccgg
gggcgcggcggctaccggcccggggtcgccgggctggcaccgcagcggcgcaccccaccg
aggttcgccgtcgtcgacgccctcgacgccgacgccctgctccccgcgatctacttcatc
ttctcccgcgccgggtgcgagggagccgtgcagcagtgcctcaccgccgggctgcgcctg
acctccccgcaggaggaggccgagatccgccggctcgtcgagcagcgcaccgcgaccatc
ccgcccgaggacctcgacgtgctcggctactggtcctggctgcaggcactcgcccgcggc
atcgccgcgcaccacgccgggctgctgcccgtgttcaaggagaccgtcgaggacctgttc
gcccgcggcctcgtcaaggtcgtgttcgccaccgagaccctcgcgctcggcatcaacatg
cccgcccggtccgtcgtcctcgaaaagctcgtcaagtgggacggcaccgcccaccagccc
gtcacccccggcgagtacacccagctcaccgggcgggccggacgccgcggcatcgacgtc
gaggggcacgccgtcgtcgtcgaccacaccgggctcgaccccgtcgccctggccggcctc
gcctcccggcgcacctacccgctgcggtccagcttccggcccacctacaacatggccgtc
aacctcgtctcccaggtggggcacgaccgcgcccgcgaggtgctggagacctcgttcgca
cagttccaggccgaccgcggcgtcgtcgggctcgccaagcaggcccaggcgcacgccgag
gccctcgacgggtacgcccaggccatggcctgcgaccgcggggacttcgcgcagtacatg
gccatccgtcggcagatctccgaccgggagaaggagctgtcccgcgccgcgtccggcgcc
cgtcgggccgaggccgtcgcctcgttcgagaacctcaagcgcggcgacgtcgtcgaggtc
cccagcggccgccgccgcgggttcgtgctcgtcctcgaccccgggcacgacgaccgcagc
ttcgacgggccccgccccaccgtcctcacccaggagaagcaggtcaagaagctcaccctg
gccgacgcacccggcggcgtcaccgtcgtcacccgcgtcaagatccccaaggcgttcaac
ccccgccgccccgacgcccgccgcgacctcgcctccaccatgcgcaacgcgctcggcgcc
ttccgcgacgacgccgggacccgcagccacggcgccgcccgcccggggcgcggaccgggc
cgccgctccgacgccgccagcgacaaggagctcgcatccctgcggtcccggctgcgcgcc
cacccctgccactcctgccccgaccgggacgaccacgcccgctgggccgaacggcacgac
cagctcgccggcgagcaccgccgcctcgtgcagcgcatcgaagggcgcaccgggtccgtc
gcccgcatcttcgacaagacgtgcaccgtcctggagaccctgcgctacctcgaccggtcc
gacgacgcaggctccgacgggcgcggcgagctgcaggtcaccgccgacggcgcctggctg
cgccgcgtctacgccgagaacgacctgctgctcgccgagtgcctgcgccgcggcacctgg
gacggcctcgacgcccccggcctggccgccgccgtctccaccgtcgtctacagcgggcgg
cgtgaggacgccgccgaaccgtacgtgcccggcggcccgcacgggcggctcgcgcaggcg
ctcgacgcgaccgtgcgcgtgtggtccgaggtgaccgacctcgaggagctgcacggcctc
gacgccaccggccccctggacctcggcatcgtcgcccccgtgcaccgctgggccggcggc
aagggcctcgacgccgtgctgcgcggcaccgatctcgccgccggtgacttcgtgcgctgg
tgcaagcaggtggtcgacgtcctcgaccagctcgcccaggccgcccccacccccgcgctg
cgcgccacggcccgcaaggcccagcacgccgtgctgcgcggcgtcgtcgcctactccagc
gtctga
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