Xylanimonas cellulosilytica: Xcel_1988
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Entry
Xcel_1988 CDS
T01135
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
xce
Xylanimonas cellulosilytica
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xce03032
]
Xcel_1988
03400 DNA repair and recombination proteins [BR:
xce03400
]
Xcel_1988
Enzymes [BR:
xce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Xcel_1988
DNA replication proteins [BR:
xce03032
]
Prokaryotic type
DNA Topoisomerases
Xcel_1988
DNA repair and recombination proteins [BR:
xce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Xcel_1988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACZ31007
UniProt:
D1BTM8
LinkDB
All DBs
Position
complement(2142968..2145115)
Genome browser
AA seq
715 aa
AA seq
DB search
MTTTASPESSSAEKNYTARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNSVDE
ALGGFATKIAVVLHADSSVTVTDDGRGIPVDVEPKTGLSGVEVVFTKLHAGGKFGGGSYT
ASGGLHGVGASVVNALSARLDVEVDRGGKTYRMTFHRGEPGTFADGPAGASPESAFSPFI
ERSELAVVGRAKRGVTGTRVRYWADRQIFPKSAVFSYDELVTRVRQTTFLVPGLEITVRD
ERGLPGTPGADGPHEEMFVHHGGAVDFVDFLAPDAPVTATWTLRGSETFTETVPVLDERG
HMSPREVQRDCEVDIALRWGTGYDTELRTFVNIIATPKGGSHLTGFEQGLVKVVRKQVEA
NARRLKISAKDGGERLEKDDITAGLTAVVTVRLAEPQFEGQTKEVLGTAPVRAIVARTVE
KQLGAILTSTKRDDKAQASLLLDKVVAEMRARVSARKQKEISRRKNALETSSLPAKLADC
RSDDVERSELFIVEGDSALGTAKLARSSDFQALLPIRGKILNVQKASISDMLRNAECAAI
IQVLGAGSGRSFDLDAARYGKVVLMTDADVDGAHIRTLLLTLFYRYMRPLVEAGRVFAAV
PPLHRIEVYGARGKGNEYIYTYSEAELQATLKRLDRAGKRYKDDIQRYKGLGEMDADQLA
ETTMDPRHRTLRRVTAQHAEAAERVFELLMGSDVAPRKDFIISGAESLDRSRIDA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccaccgcctccccggaatcgagctccgccgagaagaactacacggcccggcac
ctctcggtgctcgaagggctggaggcggtgcgcaagcgtccgggcatgtacatcgggtcc
accgactcgcgcggcctcatgcactgcctgtgggagatcatcgacaactcggtcgacgag
gcgctgggcgggttcgccacgaagatcgcggtcgtgctgcacgcggactcctcggtgacg
gtgaccgacgacggtcgcgggatcccggtcgacgtcgagcccaagacgggcctgagcggt
gtcgaggtcgtgttcaccaagctgcacgcgggcggcaagttcggcggcgggtcctacacg
gcctcgggcggtctgcacggtgtcggcgcgtccgtcgtcaacgcgctgtcggcgcggctc
gacgtcgaggtggaccgcggcggcaagacgtaccggatgacgttccaccgcggtgagccg
ggcaccttcgccgacggcccggcgggggcgtcgcccgagtcggcgttctcgccgttcatc
gagcgcagcgagctcgccgtcgtcggccgggccaagcgtggggtgacgggcacccgcgtc
cggtactgggccgaccggcagatcttcccgaagtccgcggtgttcagctacgacgagctg
gtcacgcgcgtgcgccagacgacgttcctggtgccgggcctggagatcaccgtgcgcgac
gagcgcggcctgccggggactccgggcgccgacgggccgcacgaggagatgttcgtccac
cacggcggagcggtcgacttcgtcgacttcctcgccccggacgcgcccgtcacggcgacg
tggacgctgcgcggcagcgagacgttcaccgagacggtgccggtgctcgacgagcgcggc
cacatgtcgccgcgcgaggtgcagcgggactgcgaggtcgacatcgccctgcgctggggc
accggctacgacaccgagctgcgcaccttcgtcaacatcatcgccacgcccaagggcggc
tcccacctcaccgggttcgagcagggcctggtcaaggtggtgcgcaagcaggtcgaggcc
aacgcccgccgcctgaagatcagcgcgaaggacggcggggaacggctcgagaaggacgac
atcaccgcgggcctgaccgccgtcgtgaccgttcgcctggccgagccgcagttcgagggc
cagacgaaggaggtgctgggcaccgcgccggtgcgcgcgatcgtcgcacgcaccgtcgag
aagcagctcggcgcgatcctcacctccaccaagcgggacgacaaggcgcaggcctcgctg
ctgctcgacaaggtggtcgcggagatgcgggcgcgggtgtcggcgcgcaagcagaaggag
atctcgcggcgcaagaacgcgctggagacgtcctcgctgccggccaagctggccgactgc
cggtccgacgacgtcgagcgctcggagctgttcatcgtcgagggcgactcggcgctcggc
accgcgaagcttgcccggtccagcgacttccaggcgctcctgcccatccgcggcaagatc
ctcaacgtccagaaggcgtccatcagcgacatgctgcgcaacgccgagtgcgcggccatc
atccaggtgctgggcgccggctcgggccggtccttcgacctggacgccgcgcgctacggc
aaggtcgtgctgatgaccgacgccgacgtcgacggtgcgcacatccgcaccctgctgctc
acgctcttctaccggtacatgcgtccgctcgtggaggccggccgcgtgttcgcggccgtg
ccgccgctgcaccgcatcgaggtgtacggggcgcgcggcaaggggaacgagtacatctac
acgtactcggaggccgagctgcaggccacgctcaagcggctcgaccgtgcgggcaagcgc
tacaaggacgacatccagcgctacaagggtctgggcgagatggacgccgaccagctcgcg
gagacgacgatggacccccgccaccgcacgctgcgccgcgtcaccgcccagcacgccgag
gcggccgagcgcgtcttcgagctgctcatgggctccgacgtcgcgccgcgcaaggacttc
atcatctccggggcggagtcgctggaccgctcgcgcatcgacgcctga
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