Xylanimonas cellulosilytica: Xcel_2090
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Entry
Xcel_2090 CDS
T01135
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xce
Xylanimonas cellulosilytica
Pathway
xce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Xcel_2090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xce03019
]
Xcel_2090
03400 DNA repair and recombination proteins [BR:
xce03400
]
Xcel_2090
Enzymes [BR:
xce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Xcel_2090
Messenger RNA biogenesis [BR:
xce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Xcel_2090
DNA repair and recombination proteins [BR:
xce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Xcel_2090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Umbravirus_LDM
Motif
Other DBs
NCBI-ProteinID:
ACZ31108
UniProt:
D1BU95
LinkDB
All DBs
Position
complement(2241526..2243391)
Genome browser
AA seq
621 aa
AA seq
DB search
MTIPTTTSPAATGPALDVLRRVFGYDAFRGEQAAVIDTVVGGGDALVLMPTGGGKSLCYQ
IPALVREGTGVVVSPLIALMQDQVDALAALGVRAAFLNSTLSFEARRDVERALVAGELDL
LYLAPEALRNRTTLDLLDQARIALFAIDEAHCVSQWGHDFRPDYLELSMLHQRWPTVPRI
ALTATATAATRTEIATRLDLAGARHFVSSFDRPNITYRIVPKDRPDKQLLELLRTEHGHA
DGRGDAGIVYCLSRASVEKTAAMLVQNGIEALPYHAGLPAGVRAANQSRFLREDGVVMVA
TIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLADVVQQRRLI
ETSEGDPAHRRNLAQHLNAMLALCETVECRRAQLLAYFGQEHPGACGACDTCVAPPEAWD
GTVAAQKVLSTVLRLARERGQSFGVGQVIDILLGRDTEKVRRFRHQDLTVFGVGTDLAEP
EWRAVVRQLLAQGLLTVEGVHGTLVLTEASGEVLAGRREVRMRHEPERPARTARARKTAV
VEDLAEADTALFEALRTWRAGEAKAQGKPAYIVFGDATLRGIATARPGTPGELAAVSGVG
ETKLERYGEAVLAVVAAVSAQ
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatcccgacgacgaccagccccgctgcgaccggtcccgcgctcgacgtgctgcgc
cgcgtcttcgggtacgacgccttccgcggcgagcaggcagccgtcatcgacacggtcgtc
gggggtggggacgcgctcgtgctgatgcccaccggcggcggcaagtcgctgtgctaccag
atccccgcgctcgtgcgcgagggcaccggcgtcgtcgtctccccgctcatcgcactcatg
caggaccaggtcgacgccctcgcggcgctcggtgtgcgggccgcgttcctcaactcgacg
ctgtccttcgaggcgcgccgcgacgtcgagcgggcgctcgtcgcgggcgagctggacctg
ctctacctggctcccgaggcgctgcggaaccgcaccaccctcgacctgctcgaccaggcc
cggatcgcgttgttcgcgatcgacgaggcgcactgcgtgtcccagtgggggcacgacttc
cggcccgactacctcgagctgtccatgctgcaccagcggtggcccacggtgccgcgcatc
gcgctgacggcgacggcgacggccgcgacccgcaccgagatcgccacccggctggacctg
gcgggcgcacgccacttcgtctccagcttcgaccggcccaacatcacctaccggatcgtg
cccaaggaccgccccgacaagcagctcctggagctgctgcgcaccgagcacggccacgcc
gacgggcgcggtgacgccggcatcgtctactgcctgtcgcgggcatcggtggagaagacg
gcggcgatgctcgtccagaacggcatcgaggcgctgccgtaccacgcggggctgcccgcc
ggggtgcgggccgcgaaccagtcccggttcctgcgcgaggacggcgtggtcatggtcgcg
accatcgcgttcgggatgggcatcgacaagcccgacgtccggttcgtcgcgcacctcgac
ctgcccaagtcggtggaggggtactaccaggagacgggccgcgccggccgtgacggcctg
ccgtcgacggcgtggctcgcgtacgggctcgccgacgtcgtccagcagcgacggctgatc
gagacgtccgagggggacccggcgcaccggcgcaacctcgcccagcacctgaacgcgatg
ctcgccctgtgcgagaccgtcgagtgccggcgggcccagctcctcgcgtacttcgggcag
gaacacccgggggcgtgcggggcgtgcgacacctgcgtcgcgccccccgaggcgtgggac
gggaccgtggccgcgcagaaggtgctctcgacggtgctgcggctcgcacgcgagcgaggg
cagagcttcggcgtcgggcaggtgatcgacatcctgctcggccgggacaccgagaaggtg
cgccgcttccggcaccaggacctgacggtgttcggcgtcggcaccgacctggccgagccc
gagtggcgggccgtggtgcgccagctcctcgcccaggggctgctcacggtcgagggggtg
cacggcacgctcgtgctcaccgaggcgtccggcgaggtgctggccgggcgtcgtgaggtg
cggatgcgccacgagcccgaacggcccgcccggacggcgcgggcccgcaagactgctgtg
gtggaggacctggccgaggccgacacggccctgttcgaggcgttgcgcacctggcgcgcg
ggggaggccaaggcgcagggcaagcccgcgtacatcgtcttcggcgacgcgaccctgcgg
ggcatcgcgaccgcccggcccgggacaccgggcgagctggcggccgtctccggggtcggc
gagaccaagctggagcggtacggcgaggcggtgctcgcggtggtcgcggcggtttccgcg
cagtag
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