Xylanimonas cellulosilytica: Xcel_2272
Help
Entry
Xcel_2272 CDS
T01135
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xce
Xylanimonas cellulosilytica
Pathway
xce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Xcel_2272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xce03400
]
Xcel_2272
Enzymes [BR:
xce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Xcel_2272
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Xcel_2272
DNA repair and recombination proteins [BR:
xce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Xcel_2272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ACZ31290
UniProt:
D1BV51
LinkDB
All DBs
Position
complement(2458039..2459058)
Genome browser
AA seq
339 aa
AA seq
DB search
MPELPEVETVRDGLARHVVGARVREVEVLRDYSVRRQDGGPSAFASLIEGATLTAAARRG
KFLWLPLAAAPVVEPVETTPLDPAGVVSTGSTTDAGSTTRTALLAHLGMSGQLLVRDGRD
PWAHPHLRVRLHLTGAPTGATALDFVDQRTFGHLAVVGLVPTPDGAPGGLGTDEPAVPGP
VAHIARDLLDPELAPGTPGRAAVIAAVRRRRTGIKRALLDQTLVSGIGNIYADEALWRAR
VHYARATDVLRPVEVARVLDAAEDVMREALAVGGTSFDTLYVNVNGESGYFARGLAAYGR
AGEPCPRCGTPIVRDTFMNRSAHWCPRCQPRPRGANARW
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctccccgaggtcgagaccgtccgggacggactcgcccgccacgtggtcggc
gcgcgcgtccgcgaggtcgaggtgctgcgcgactactcggtacgccgccaggacggcggc
ccgtccgcgttcgcgtccctcatcgaaggcgcaacgctgacggccgcagcccgccgcggc
aagttcctctggctcccgctcgccgccgccccggtggttgagcctgtcgaaaccacccca
ctcgatcccgcaggggtggtttcgacaggctcaaccaccgacgccggctccaccacgagg
accgcactcctcgcgcacctgggcatgtccgggcagctcctcgtccgcgacggccgcgac
ccctgggcccatccccacctgcgcgtccgcctgcacctgacgggtgcacccaccggcgcc
accgcgctcgacttcgtcgaccagcgcaccttcgggcacctcgccgtcgtcggcctcgtc
ccgacgcccgacggcgcccccggcgggctcggcaccgacgaaccggccgtccccgggccc
gtcgcgcacatcgcccgcgatctgctcgatcccgagctcgcccccggcacgcccggtcgc
gccgcggtgatcgccgcggtccgacgacggcggacgggtatcaagcgcgcactgctcgac
cagacgctggtcagcggtatcgggaacatctacgccgacgaggcgctgtggcgggcgcgc
gtgcactacgcgcgggcgacggacgtgctgcggccggtcgaggtcgcccgggtgctcgac
gccgccgaggacgtcatgcgcgaggccctcgccgtcggcggcacgagcttcgacaccctg
tacgtcaacgtcaacggcgagtcggggtacttcgcgcgtggcctggccgcgtacgggcgt
gcgggtgagccgtgcccccgctgcgggacaccgatcgtgcgggacacgttcatgaaccgc
agcgcccactggtgcccgcgctgccagccccgcccgcgtggggccaacgcgcgctggtag
DBGET
integrated database retrieval system
