Xanthomonas citri pv. citri mf20: J172_00139
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Entry
J172_00139 CDS
T03781
Name
(GenBank) Topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcf03032
]
J172_00139
03400 DNA repair and recombination proteins [BR:
xcf03400
]
J172_00139
Enzymes [BR:
xcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J172_00139
DNA replication proteins [BR:
xcf03032
]
Prokaryotic type
DNA Topoisomerases
J172_00139
DNA repair and recombination proteins [BR:
xcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J172_00139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AJZ06741
UniProt:
A0A0U5F7N1
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All DBs
Position
44328..45515
Genome browser
AA seq
395 aa
AA seq
DB search
MKAKRVLRNATVAASTAGKLAAVATGAAVATAAVASAAAVAQAKATARAAGLTYVNDQQP
GISRRKAGKSFSYRDADGQRIADAETLQRIRSLAIPPAYTEVWICAKPNGHLQATGRDAR
RRKQYRYHADWALVRGEGKFERVIAFGTALPKLRRRLRRDLLLPGFPREKVLAIVVALLA
DTLVRVGNAEYARSNRSYGLTTLRNRHMEFLKGGRARLKFRGKSGQDHDIEVDDKQLVKL
IRQCQQLPGQSLFQYRDDDGQLQPVDSGEVNDYLREAMGEDFTAKDFRTWGGTLAALQRL
ARLPLPERSSERALTQVQNDVIREVADALGNTPSVCRKAYIDPCVFEGWRAGQLQAMATG
VRGERQWEAATLRFLSASRSKLKAQAKPASKRKSA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaacgtgttcttcgcaatgccacagtggccgccagtaccgccggcaagctc
gcggcggtcgccaccggcgcggctgtcgccacagccgccgtggcaagcgcggcagcggtg
gcgcaggccaaggcgaccgcgcgagcggccgggctgacctatgtcaacgatcaacagccc
ggcatcagccgccgcaaggccggcaagagcttcagttaccgcgatgccgacgggcaacgc
attgccgatgccgagaccttgcagcgcatccgttcgctggcgattccgccggcctatacc
gaagtgtggatctgcgccaagcccaatggccatctgcaggccaccgggcgcgatgcgcgg
cggcgcaagcaataccgctatcacgccgattgggcgctcgtgcgtggcgaaggcaagttc
gaacgcgtgatcgccttcggcaccgcgctgcccaaactgcggcggcggttgcgtcgcgat
ctgctgctgccgggatttccacgcgaaaaggtgttggcgatcgtggtggcgttgctggcc
gacaccctggtgcgcgtcggcaatgccgaatacgcgcgcagcaatcgttcgtacggactg
accacactgcgcaaccggcacatggaatttctgaaaggcggacgcgcgcggctgaagttc
cgcggcaagagcggccaggaccacgatatcgaagtggacgacaagcagctggtcaaactg
atccggcaatgccagcagctgccggggcaatcgctgttccagtaccgcgacgacgatggc
cagttgcagccggtggattcgggtgaggtcaacgactatctacgcgaggcgatgggcgaa
gacttcaccgccaaggatttccgcacctggggcggcaccttggctgcattgcagcggctg
gcacgcctgccattgcccgagcgtagcagcgaacgcgcgttgacgcaggtgcagaacgat
gtcatccgtgaggtagccgatgccttgggcaacacgccctcggtgtgtcgcaaggcctac
atcgacccatgcgtcttcgaaggctggcgtgcgggccagctgcaggccatggccaccggt
gtgcgtggcgagcgccagtgggaagcggccacgctgaggttcttgagcgcttcgcgtagc
aagctcaaggcacaggcaaagccggcgtcgaagcggaagtccgcatag
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