Xanthomonas citri pv. citri mf20: J172_00634
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Entry
J172_00634 CDS
T03781
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
xcf
Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcf03000
]
J172_00634
03036 Chromosome and associated proteins [BR:
xcf03036
]
J172_00634
03400 DNA repair and recombination proteins [BR:
xcf03400
]
J172_00634
Transcription factors [BR:
xcf03000
]
Prokaryotic type
Helix-turn-helix
Other families
J172_00634
Chromosome and associated proteins [BR:
xcf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
J172_00634
DNA repair and recombination proteins [BR:
xcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
J172_00634
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Phage_NinH
HTH_29
BrkDBD
Xre-like-HTH
ZNHIT3_C
HTH_28
HTH_23
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AJZ07233
LinkDB
All DBs
Position
complement(612949..613221)
Genome browser
AA seq
90 aa
AA seq
DB search
MNAAPSRPDTSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYEIVLREMEIPLFVEVLN
HCEGNQSRAAAMLGIHRATLRKKLKEYGLT
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcagccccctctcgtcctgacaccagtcgtggcgccccgaagtcgcccctgcgc
gaacacgtggcccagtccgttcgccgttatctgcgcgacctggacggcagcgacgcggac
gacgtttacgaaatcgtgctgcgcgagatggagatcccgttgttcgtcgaagtgctcaac
cactgcgaaggcaatcagagccgcgctgcggcgatgctgggcattcatcgggcaaccttg
cgcaagaagcttaaagagtacgggctgacgtaa
DBGET
integrated database retrieval system