Xanthomonas citri pv. citri mf20: J172_01215
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Entry
J172_01215 CDS
T03781
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Pathway
xcf03030
DNA replication
xcf03430
Mismatch repair
xcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J172_01215
03430 Mismatch repair
J172_01215
03440 Homologous recombination
J172_01215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcf03032
]
J172_01215
03400 DNA repair and recombination proteins [BR:
xcf03400
]
J172_01215
Enzymes [BR:
xcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J172_01215
DNA replication proteins [BR:
xcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J172_01215
DNA repair and recombination proteins [BR:
xcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J172_01215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AJZ07798
UniProt:
A0A0U5FAE1
LinkDB
All DBs
Position
1244340..1245074
Genome browser
AA seq
244 aa
AA seq
DB search
MRQIILDTETTGLEWRKGNRVVEIGAVELLERRPSGNNFHRYLKPDCDFEPGAQEVTGLT
LEFLADKPLFGEVVDEFLAYIDGAELIIHNAAFDLGFLDNELALLGDHYGRIVERATVVD
TLMMARERYPGQRNSLDALCKRLGVDNSHRQLHGALLDAQILADVYIALTSGQEEIGFAS
ADAGQQADAASGMIAFDPALLLPRPRVAVTASESQAHEARLAQLRKKAGRALWDPPVEEI
AVAG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagatcattctcgataccgaaaccaccggcctggaatggcgcaagggcaaccgc
gtcgtcgaaatcggcgcggtggagctgctggagcggcgcccgagcggcaacaatttccat
cgctacctgaagccggactgcgacttcgagccgggcgcgcaggaggtgaccgggctgacc
ctggaatttctggccgataaaccgctattcggcgaggtggtggacgagtttctcgcctat
atcgacggcgcggaactgatcatccacaacgccgcgttcgacctggggtttctggacaac
gaactggcgctgctgggcgatcactacgggcgcatcgtcgagcgcgccacggtggtggat
accttgatgatggcgcgcgagcgctatccggggcagcgcaattccttggatgccctgtgc
aagcgtctgggcgtggacaactcgcatcgccagttgcacggcgccttgctcgatgcgcag
atcctggccgatgtgtatatcgcgctgacctcgggtcaggaggagatcgggtttgccagt
gccgacgccggccagcaggccgacgccgcgagcggcatgatcgcgttcgatccggcgctg
ctgttgccgcgtccgcgcgttgcggtgaccgcttccgaatcgcaggcgcacgaggcgcgt
ctggcgcagttgcgcaagaaagcggggcgtgcgttgtgggatccgccggtcgaagagatt
gccgtcgccgggtaa
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