Xanthomonas citri pv. citri mf20: J172_01235
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Entry
J172_01235 CDS
T03781
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Pathway
xcf03030
DNA replication
xcf03430
Mismatch repair
xcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J172_01235
03430 Mismatch repair
J172_01235
03440 Homologous recombination
J172_01235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcf03032
]
J172_01235
03400 DNA repair and recombination proteins [BR:
xcf03400
]
J172_01235
Enzymes [BR:
xcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J172_01235
DNA replication proteins [BR:
xcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J172_01235
DNA repair and recombination proteins [BR:
xcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J172_01235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
ResIII
AAA_18
PIF1
AAA_30
AAA_7
Mg_chelatase
nSTAND3
AAA_19
TsaE
AAA_2
AAA_24
SKI
Motif
Other DBs
NCBI-ProteinID:
AJZ07815
UniProt:
A0A0U5FAI8
LinkDB
All DBs
Position
1259800..1261869
Genome browser
AA seq
689 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEPIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLHALTDGDGARLLQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGSDDGRGATAGGGARSAAAGGQLAAPVAAAPVTSAPAVVAAPTAVTDTMPVAAAE
ASLPASGTRATPAPLVVLSPQESSPASRASAANARNDDTPPWAVDDAPVRARATPTPDTM
GVLAPEAAMAPPSAPVELAQPDGIASDAAVEAPASVVVPSPAALVEPSSPEEPAVVASAA
TAGAASDAATDAAALLDDGRIADAEQWLELVTRSGLNGPSRQLAANAAFIGHRDGVLRLA
LAPGFEYLNSERSIANLAQALAPVLGNAPRIVVETGSADVETLHERASRQKGERQSAAET
AFMNDPTVQLLVQQQGARIVPDSIRPYDE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcttgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtaggc
caggaacacgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcatcacgcg
ttcctgttcaccggcacccgtggcgtgggcaagaccaccatcgcgcgcattttcgccaaa
tcgctcaattgcgagaccggcaccagtgccgatccgtgcgggacgtgcccggcctgcctg
gacatcgatgccggtcgctacatcgacctgctggagatcgacgccgcgtccaacaccggc
gtggacgacgtgcgcgaggtgatcgagaacgcccagtacatgccctcgcgcggaaagttc
aaggtctacctgatcgacgaagtgcacatgctctccaaggcggcgttcaatgcgctgctg
aagacgctggaagagccgccggaacacgtgaagttcctgctggccaccaccgatccgcag
aaacttccggtgacggtgctgtcgcgctgcctgcagttcaacctcaagcggttggacgaa
gaccagattcagggccagatgacacgcatcctggccgccgaaccgatcgaatcggatccg
tcggcgatcgtgcagctgtccaaggcggccgacggttcgctgcgcgatggtctgtcgctg
ctggaccaggcgatcgcctatgccggcggcgcgctgcgcgaggacgtggtgcgcaccatg
ctgggcacggtcgatcgcacccaggtcggcgccatgctgcacgcgttgaccgacggcgat
ggcgcgcgcctgctgcaggtagtggcggcgctggccgaattttcgcccgactggagcggc
gtgctggaggccctggccgaggcgttgcatcgagtgcaggtgcagcagctggtgccctcg
gtggcctttgtcggcgacggcatcgacccaaccccgtttgcagcgcagctgcggccggaa
gtggtgcagttgtggtaccagatggcgctgaacgggcgccgcgatctgtatctggcgccc
agcccgcgcgccggtttcgaaatggcggtgctgcgcatgctcgcctttcgccccgcagcg
gcggtaccggctggcggctcggatgacgggcgcggtgccactgctggcggtggcgcgcgt
tcggccgctgccggcggtcagcttgctgctccagtagcggcggcaccggtgacgtccgcg
cccgccgtagtggccgcgccgactgcggtgacggatacgatgcctgttgcggctgcggag
gcgtccttgccggcatcagggacccgggcaactccggctccccttgtcgtgctttctccc
caagagtcttctccggccagtcgcgcgtctgcagccaatgcgcgcaatgacgacacgccg
ccctgggcagtggacgatgcgccggtgcgtgcgcgggccacgcctacacccgacacgatg
ggcgtgcttgcgcctgaagcggcaatggctccgccgtctgcacccgtcgagctcgcgcaa
cccgatgggattgcgtctgacgctgcggtggaagctccggcttcggttgtagtgccttca
ccggccgcgcttgtcgagccctcgtcgcctgaagagccagcggtggtcgcgtcagcggca
acggcaggggctgcatcagacgcggcaaccgacgcggcggccctgctcgatgacggccgc
atcgccgatgccgagcaatggctggagctggtgacgcgcagtggcttgaatggcccgtcg
cgccagctggccgccaacgccgcgtttatcggccatcgcgatggcgtgctgcggctcgca
ctcgcgccgggcttcgaatatctcaactccgagcgctccatcgccaatctcgcgcaggcg
ctggcaccggtgttgggaaacgcgccgcgcatcgtcgtcgaaaccggcagcgccgacgtc
gaaaccttgcatgagcgtgccagccgccagaaaggcgagcgccagagcgcggccgaaaca
gccttcatgaacgacccgacggtgcagctgctggttcagcagcaaggcgcgcggatcgtg
cccgattccatccgcccttacgacgagtaa
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