Xanthomonas citri pv. citri mf20: J172_01502
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Entry
J172_01502 CDS
T03781
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcf03016
]
J172_01502
Enzymes [BR:
xcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
J172_01502
Transfer RNA biogenesis [BR:
xcf03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
J172_01502
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJZ08078
UniProt:
A0A0U5FHH8
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All DBs
Position
1573277..1573879
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AA seq
200 aa
AA seq
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MKQQFLYLSSAEAQLSLGLGEEKTTERLFFAVMADAPTAEHAARIADGLLRGGHAEGKPL
ARERLHVTLHHLGDYAGGLPPSLVSRASQAATRVQMDAFAVEFDRVGTFGGRRSQLPCVL
RGEEQVRGLYELQGALGRQLAHVGIAGDAQYTPHMTLLYCNQAVPQRRCDALAWTVRDFA
LVRSFLGQSRYQIEGRWSLR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacagttcctgtacctgtcatcggccgaggcgcagttgtcgctcgggcttggg
gaagagaaaacgaccgaacgtctgtttttcgcggtgatggccgatgcgcccactgccgaa
catgccgcgcggattgccgacggcctgttgcgaggcgggcacgccgaaggcaagccgcta
gcgcgcgaacggctgcatgtgaccctgcatcatctgggcgattacgccggtggtctgccg
ccctcgttggtgagccgcgccagccaggccgcgacgcgcgtgcagatggacgcgttcgca
gtggagttcgatcgcgtcggcaccttcggtggcaggcgctcgcaacttccctgcgtgctg
cgtggcgaagagcaggtgcgcgggctttacgagctgcagggcgcattgggaaggcagctg
gcgcatgtcggcattgccggcgacgcgcaatacacgccgcacatgacgctgctgtactgc
aatcaggcagtgccgcagcggcgctgcgatgcgcttgcctggaccgtgcgcgacttcgcg
ctggtgcgcagctttctcggccagtcgcgttaccagatcgaaggccgctggtcgctgcgc
tga
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