Xanthomonas citri pv. citri mf20: J172_01616
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Entry
J172_01616 CDS
T03781
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcf03400
]
J172_01616
Enzymes [BR:
xcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J172_01616
DNA repair and recombination proteins [BR:
xcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J172_01616
Prokaryotic type
J172_01616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CUB_M02D8_5_4th
Motif
Other DBs
NCBI-ProteinID:
AJZ08191
UniProt:
A0A0U5FBV9
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All DBs
Position
1706085..1707503
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AA seq
472 aa
AA seq
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MSYAIVWFRRDLRLEDNPALRAALDAGHHPIPLYIDAPHEEGEWTPGAASRTWRHRSLAA
LDGALRALGSGLVIRVGNSAQVLDEVIAQTGAVAVYWNRKYEPATQPRDAQIKRDLRERG
IEVQSCNCALLFEPWQLSTQQGGPYKVFTPFWRNALTQLQLPAAIGAPRSLPPLPASLKT
DALDTLQLVPGLQWDQGFWEHWQPGEAGAHEMLEIFIDGALSGYRENRDRPDRVGTSQLS
PHLHFGEIAPWRIANTLETHRTARNGAEIDAYIRQLGWRDFAYHLLHHFPDTTNQNLNPR
FAGFDWATVDPVALQAWQRGRTGIPIVDAGMRQLWHTGWMHNRVRMIVASFLCKHLRIHW
IEGARWFWDTLVDADLANNTLGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQAAYITRWV
PELGKLAVKERFAPWLHPLSLARLAPEYPRTPIIGLAEGRDAALAAYAKTRG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacgccatcgtctggttccgtcgcgatctgcgtctggaagacaacccggccttg
cgcgccgcactcgatgcggggcatcacccgattccgttgtacatcgacgcgccgcacgaa
gagggcgaatggacgcctggcgccgcatcgcgcacctggcggcatcgctcgcttgcagcg
ctggacggcgccttgcgcgcgctcggcagcgggctggtcattcgcgtcggcaacagcgcg
caggtgctggatgaggtgatcgcgcagaccggtgcggtggcggtgtactggaaccgcaag
tacgagccggccacccagccgcgcgatgcgcagatcaagcgcgatttgcgcgagcgcggc
atcgaggtgcagagctgcaattgcgcattgctgttcgaaccgtggcagttgtccacgcag
cagggcggcccctacaaggtgtttaccccgttctggcgcaacgcgctgacgcagttgcaa
ttgcccgccgcgataggtgcgccgcgcagtctgccgccattgcctgcaagcttgaagacc
gatgcgctcgacacgctgcaattggtgccgggcctgcagtgggaccagggtttctgggag
cactggcagcccggcgaagccggcgcgcacgaaatgctggagatctttatcgacggcgcg
ttgtctggatatcgcgaaaaccgcgatcgccccgatcgcgtcgggacctcgcaactgtcg
ccgcatctgcacttcggcgaaattgcgccgtggcggatcgccaacaccctggagacgcat
cgcactgcgcgcaatggcgcagaaatcgatgcctatatccggcagcttggctggcgcgac
tttgcctatcacttgctgcatcacttcccggacaccaccaaccagaatctcaatccacgc
tttgcaggattcgattgggcaacggtcgatccggttgcattgcaggcctggcagcggggc
cgcactggcattccgatcgtcgatgccggcatgcgccagctctggcataccggttggatg
cacaatcgcgtgcgcatgatcgtcgccagttttttgtgcaagcatctgcgcatccactgg
atcgaaggcgcgcgctggttctgggacacgctggtggatgcggacctggccaacaacacc
ctgggctggcagtgggtggccggcaccggcgccgatgcggcgccgtatttccgtgtgttc
aatccggtcacgcaggcggagaagttcgatccgcaggccgcctacatcacgcgctgggta
cctgagctcggcaagcttgcggtgaaggaacgcttcgcgccgtggctgcatccgttgtcg
ctggcgcggctggcaccggagtatccgcgcacgccgatcatcggcctggccgaagggcgc
gatgcggcgctggcggcgtatgcgaaaacgcgcggctag
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