Xanthomonas citri pv. citri mf20: J172_02013
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Entry
J172_02013 CDS
T03781
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xcf
Xanthomonas citri pv. citri mf20
Pathway
xcf03410
Base excision repair
xcf03430
Mismatch repair
xcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J172_02013
03430 Mismatch repair
J172_02013
03440 Homologous recombination
J172_02013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcf03400
]
J172_02013
DNA repair and recombination proteins [BR:
xcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J172_02013
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J172_02013
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J172_02013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJZ08580
UniProt:
A0A0U5FEE1
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All DBs
Position
2162278..2164014
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AA seq
578 aa
AA seq
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MTSSPRIVRRSSGQAGSWPDTMLPLLRRIYAARGVTDAQGAQPRLGQLLSPELLHNSGVA
AELLADAIAQQRRILVVGDFDCDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGLSPA
LVDELAGLQPDVLVTVDHGIACHAGVAAAKARGWTVLVTDHHLPGEVLPPADAIVDPNLA
EDTFPSKTLAGVGVIFYVLLALRQVLRARGAFAQRAEPDLSVLLDLVAVGTVADLVPLDT
NNRALVSAGLRRLREGKGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMAL
GIELLLSEDWSQAREIAGTLEEINAERRAVQQLMTDDAEHAVTKVVLDGDGALPIAACLF
DAEWHPGVIGLVASKLKDRLHRPVIALAPAEPGSSQLRGSARSIPGLHIRDVLAAVDARH
PGLIQKFGGHAMAAGLSIDHAALATFEQAFQAQVTAMVDASLLHAQLHSDGELAAHELDH
LHAEALRVAGPWGQGFPEPLFDGQFEVLQHRVLKERHLKLTLRCPGRAEPLNAIHFNGWR
GSDPARLVRLAYRLVADDYRGGTAVQLIVEHCEPVALA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgagtccgcggatcgtccggcgctcctccgggcaggccggcagttggcccgat
accatgttgccgctgctgcgccgcatctatgcagcgcgcggtgtcaccgatgcgcaaggc
gcgcagccgcgactgggccagctgttgtcgccggaattgctgcacaacagcggcgtggcc
gccgagctactggccgacgcgatcgcgcagcaacggcgcattctggtggtgggcgatttc
gactgcgatggtgccaccgcctgtgccgtcggtgtgcgcggcctgcgcatgctcggtgcg
ctggatgtgcaccacgccgtgcccaatcgcatggtgcatggctatggcttgtcgcctgcg
ttggtcgacgaactggcggggttgcagccggatgtgctggtcaccgtcgatcacggcatc
gcctgtcacgctggcgtcgccgcagccaaagcgcgcggctggacggtgctggtcaccgat
caccatctgccgggcgaggtgctgccgccggccgatgcgatcgtcgacccgaacctggcc
gaagacaccttccccagcaagaccctggccggggtcggggtgatcttttacgtgttgttg
gcattgcgacaggtgttgcgcgcacgcggcgccttcgcccagcgtgccgagcctgacctg
tcggtgctgctggatctggtcgcagtcggcaccgttgccgatttggtaccgctggacacc
aataaccgtgcgctggtgtcggctggattgcgtcgcctgcgcgagggcaagggctgcatc
gggttgcgtgccttgatcgatgccagcggccgcgatgtggcgcggctgagcgccagcgat
atcgggtttgcgctcgggccacgcctcaatgccgccgggcggctcgaggacatggcgctg
ggtatcgaactgttgctcagcgaagactggagccaggcccgcgagattgccggcacgctg
gaagagatcaacgccgaacgccgcgcggtgcagcagttgatgaccgacgatgccgagcac
gccgtcaccaaggtggtgctggatggcgatggtgcattgccgatcgccgcatgcctgttc
gatgccgaatggcacccgggcgtgatcggtctggtggcctccaaactcaaggaccgcctg
caccgtccggtgatcgcgctggcaccggccgagccgggcagcagccagttgcggggttcg
gcgcgttcgattcccggcctgcatatccgcgatgtgctggcggcggtggacgcgcggcat
cccggattgatccagaagttcggcggccatgcgatggcggccgggttgagtatcgaccat
gcggcattggccacgttcgagcaggccttccaggcgcaggtgacggcgatggtggatgcc
tcgctgctgcatgcccaattgcatagcgacggcgaactggccgcgcacgaactcgatcac
ctgcacgccgaagcgctgcgcgtggccggtccatgggggcagggctttcccgagccgctg
ttcgatggtcagttcgaggtgctgcagcaccgcgtgctcaaggaacgccatctcaagttg
acactgcggtgccccggacgcgcggaaccgctcaatgccatccacttcaacggttggcgc
ggcagcgatcccgcgcgcttggtgcggctggcctatcggttggtcgccgacgactatcgc
ggcggcacggcagtgcagttgatcgtggagcattgcgagccggtggcgttggcgtaa
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