Xanthomonas citri pv. citri mf20: J172_02142
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Entry
J172_02142 CDS
T03781
Name
(GenBank) PAS domain S-box/diguanylate cyclase (GGDEF) domain
Organism
xcf
Xanthomonas citri pv. citri mf20
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_4
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
AJZ08709
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Position
2327198..2329984
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AA seq
928 aa
AA seq
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MDSGVIASMLQHPLTSAVVLLDAHGQPLAANRVAQSLGLPATLGAYADVLESSRAQLADS
GGMAPCVLPGSGGGRLEGWLRAVCDEQGQIMAFTLSIPEPKGADGTSRWEMGLDSADHGL
WDWDIPADVVYRSERWTRMLGYSEQPLPNNLTALSGLIHPEDHAHVSAAVQAHLEGRTDT
YVAEFRLRQHDGQWRWILDRGRVVSRTADGRPLRMVGTHTDVHHQKLLEQQLRDQQAQLE
EAQRIASMGSWSWDSHHDALWVSQDFLQQLGMTHVRLQGIRDILRLLAGPSVAQLRSAWR
KIKHEGMPVHFELEINGLLGANPHHLRVWAQPVFDGDGSMVRVLGQLQNVTEQRQTDALI
RWRTELLNRVSALGKIGGCEIEVDTRRMQWTEECYRIHGLRKENITLEQALSLYTQDSRD
AFEAALLRISDGGLPEQLELCFYRNSGQRVWVQVLIELDRREGLPPRFVALFRDITRERE
ANERIELLAHYDRLTGLPNRFLLREQAENAIREANERGQTLAMLLIDLDGFKSINDSFGH
ATGDNLLKLASARLHQHLRNSDLFGRFSDDEFIVLLRDMSEPEDAGHVARKLIAALGEPL
RKEHVTLKLGASIGIALQGEGLSDFDSLLRAADAAMYAAKESGRNTYHYYSQDVLLRAQR
RLELEHALQGALDREEFTLVYQPLVNTVDDASPAIEALMRWNRPGHGPCSPVEFIPIAEE
CGEIVRLGEWVIGEACRQAVVWDRAGLHFSRVAVNVSAVQLRERGFAERVLEICRDNGWP
PSRLELELTESALIRDSDSLRRCFELFEQNGVLLAVDDFGTGFSNLHYLNRFPVQRLKID
RSFVQGMLDDANTAEVTQAIVHLGHALGMQVVAEGVETVQEDALLRQQGCDEIQGYFYSR
PLSPRDMAQWLREADAGIRLGARLVIAN
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtggactcaggcgtcattgcaagcatgctgcagcacccgctgacctcggcggtggtgttg
ttggatgcgcatggccagcctctggcggccaaccgcgttgcgcaatccctcggattgccg
gcaacccttggcgcatacgccgatgtgttggaaagcagccgtgcccagctggccgacagc
gggggcatggcgccctgcgtgttgccgggcagcggcggcgggcggctggagggctggctg
cgcgcggtctgcgacgagcagggccagatcatggcgttcaccttgagcattccagaaccg
aagggtgccgatggcaccagtcgctgggagatgggcctggacagcgccgaccacggcttg
tgggattgggatattccggccgatgtggtgtatcgctccgagcgctggacacgcatgctc
ggttattccgagcagccgctgccgaacaatctcactgccttgtccgggctgattcatccg
gaagaccacgcgcatgtcagcgcggcggtgcaggcgcatctggaaggccgcaccgatacc
tatgtggccgaattccggctgcgccagcacgacggccagtggcgctggatcttggatcgc
ggccgcgtggtatcgcggaccgcggacggacgtccattgcgcatggtcggcacgcatacc
gacgtgcaccatcaaaaattgctcgagcagcagctgcgcgatcagcaggcacagctcgaa
gaagcacagcgcatcgccagcatggggagctggagctgggattcgcatcacgatgccctg
tgggtgtcgcaggatttcctgcaacaactgggcatgacccatgttcgtctgcaaggcatc
cgcgacatcctgcgcctgctggctgggccttcggtcgcgcaactgcgcagcgcctggcgc
aagatcaagcacgaaggcatgccggtgcatttcgaactggaaatcaacggcctgctcggt
gccaacccgcatcatctgcgggtgtgggcacagccggtgttcgatggcgacggcagcatg
gtgcgcgtgcttggccagctgcagaacgtcaccgaacaacgccagaccgacgcgctgatc
cgttggcgcaccgaattgctcaatcgcgtgtccgcgctgggcaagatcggcggctgcgag
atcgaggtcgacacccggcgcatgcaatggaccgaggagtgctatcgcattcacggcctg
cgcaaggaaaacatcaccctggagcaggcgctgtcgctgtatacgcaggattcgcgcgac
gccttcgaggcggcgctgctgcggatctccgatggcggactgcccgaacagctggagctg
tgtttctatcgcaactccggccagcgtgtctgggtgcaggtactgatcgagctggatcgt
cgtgagggcttgccgccgcggtttgttgccttgttccgcgatatcacccgcgaacgcgaa
gccaacgagcgcatcgagctgcttgcccattacgaccgcctgaccggtttgccgaaccgc
ttcctgttgcgcgagcaggcagaaaacgccattcgcgaagcgaacgagcgcggccagaca
ctggcgatgctgttgatcgatctggatggcttcaaaagcatcaacgattcgtttggccat
gccaccggcgacaacctgctcaagcttgcctcggcgcgcctgcatcagcatctgcgtaat
agcgacctgttcggccgcttcagcgacgacgaattcatcgtgctgctgcgcgatatgtcc
gagcccgaagatgccggccacgtggcgcgcaaactgattgctgcgctcggcgagccgcta
cgcaaggagcacgtcaccctcaagctcggcgccagcatcggcatcgcgctgcagggcgaa
gggctatcggatttcgacagcctgctgcgcgccgccgacgcggcgatgtacgcagccaag
gagtccgggcgcaatacgtaccattactacagccaggacgtgctgctgcgggcgcagcgc
cgcctggagctggagcatgcgctgcaaggcgcgctcgaccgcgaagaattcacgctggtc
tatcagccgctggtcaacaccgtggacgatgcatcgccggcgatcgaagcgctgatgcgc
tggaatcgccctggccatggtccctgcagcccggtcgaattcatcccgattgccgaagaa
tgcggcgagatcgtgcgtctgggcgagtgggtcatcggcgaagcgtgccgtcaggccgtg
gtctgggatcgtgccggcctgcatttcagccgcgttgcggtgaatgtgtctgccgtgcaa
ttgcgcgagcgcggttttgccgagcgcgtgctggaaatctgccgcgacaatggctggccg
ccgtcgcgcctggagctggagctgaccgaatctgccctgattcgcgactccgattcgcta
cgccgctgcttcgaattgttcgaacagaatggcgtgttgctggcggtggacgacttcggt
accggcttctcgaatctgcattacctcaaccggttcccggtgcagcgtttgaagatcgac
cgcagcttcgtgcaaggcatgctcgacgacgccaatacggccgaagtcacccaagccatc
gtgcatctggggcatgccctgggcatgcaggtggtcgcagaaggcgttgaaaccgtgcag
gaagatgcgttgctgcgccagcagggctgcgacgaaatccagggctatttctactcacgt
ccgttgtcgccacgcgacatggcgcagtggttgcgcgaagccgacgccggcatccggttg
ggcgcgcgtctggtcatcgccaactga
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