Xanthomonas citri pv. citri mf20: J172_02350
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Entry
J172_02350 CDS
T03781
Name
(GenBank) Putative Ig domain/Hemolysin-type calcium-binding repeat (2 copies)/hemolysin-type calcium binding protein related domain
Organism
xcf
Xanthomonas citri pv. citri mf20
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
He_PIG
HCBP_related
Motif
Other DBs
NCBI-ProteinID:
AJZ08907
LinkDB
All DBs
Position
complement(2572107..2578463)
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AA seq
2118 aa
AA seq
DB search
MGNDTLVGGNGNDALMGGEGRDTLYGGAGHDTLIGGAGADLLDGGLGNDTYVIDAADLPE
GSSDAAELLRDAGGDDTVMLSGAVSSSRTDKGQDLAMRMGEVSERRGLVLENGFTGAFET
LVVNGVQVSTARWIRANVTEDKNLTAEAGGKAYGGRGADRLSLGAGGGMLQGAAGNDIFD
IAQARDSGGAVLTFERGDGLDTVTGAVSAQTQAARAANVFEFGEGIAADGVALVRKFDGQ
GMALYLRYGDGDDMVRLDGLSGSDDRPFDLARFADGSELAWTDLVARGIVLDMRERTDGN
AGRGDGTPYRDLITGRDGADRIYAGAGDDVVTAGAGDDQIWGDLGNDTIDAGAGNDTVDS
GQGRDTFFYSRGDGVDRYSAGMAAPADGDVIRFKEGLAQSDLMFSRVEDDLLVRVIGTQD
RLTVKAAFTSQPLSRIEFGDGRAVAFADLALTPGQAQATAGNDSEIHLLPTGDTVDALAG
SDTVYGGVGNDTIDGGEGADMLYGGAGDDALTDARGDNTFDAGDGNDRITGMGTSVDAGA
GDDVVEVPGARVKLGTGSDTLVVRRSAGPVGATLLVDGQTQNGSGRTVRFAAGLTPAQVG
ISSVPGEGGRKDLLVTWAGEGNAGTQELRILGFMDFAEGQRGLRFVFDDAPQTLWSWGDV
FNRANSGTPGDDALRGTPGDDELRGLAGNDTIDGLAGNDMLDGGAGADTLRGGDGNDVLI
AGEGGAAGSDTLYGDAGDDILVASLTGPSQLSGGAGGDTFRIGPSGGLHTIVRDDAEARD
VLEFDAAITPGQVSVAHMDGAAVLSVRDVPTGALKTTVVLSGLFSSGQPGGVAQVRFAGD
PATVWTLQDLQRQALVGGAGHDRLTGFDFSDDRLVGGAGDDVLSGRGGNDVLSGGAGFDT
LAGGAGDDAYLVGRGDGRDVITEAGGSDTLRFGADIAAADVRLVRTSSAPADATGRAAAY
GATDSLVVVVPGAGQVWIPGFFGADGGVEVFEFSDGTRWNAQDIQGRIVDARGAAGAQQG
TAADDTFTVDHPGDTVAEGAGQGTDTIRSAVSYVLPTDVENLTLTGTLDIAGVGNGANNV
IVGNAGSNVLDGKEGLERLEGGAGDDIYVDMAGDAYAINKDEIVEQANGGNDTLLLDAKS
RSLADNVENLVLVDWTNTTRVVPVDSYYGFQSSSLLYDGRSDDTRVRLSGNALDNVIDAT
NQGRISTMMMRDRSDAFGGLVLDGAGGNDTLIGGVEDDFYLVDSAGDKVVETGVDANGKQ
VSVNDTIVSSSVSVDLSAVANVEHVELLGDQTLSATGDDQANQIRASRNTARNVLTGRGG
DDTYYVGLNDVVVEVAGGGTDRVILDVVAMGQAAWRSNGKVFRLDDYANVENLAANGRLR
GSDPAQGVHLIGNAGNNTVSGSFQDDIVEGGDGDDVVEDQYAAIRPAAALWSAGQDRDEL
KGGAGNDRLVSYAGLDTMDGGAGNDVLVGGDIYLFGRGDGRDVIESWTGRVSGERSQTLR
FKSGVTAQDVVLRRDGDSLEVSLRGSQDAVTVKSFYQDAAASGVRRIEFADGTAWERDTL
LRRADPNAVNHAPVLAAPLADARASTGAAFSFTVPVEAFKDEDAGDTLTYRATRADGSAL
PSWLGFDAATRTFSGTPAQGDVGAIDVQVTATDGLGAAVSDTFSLVVDKGNRAPVAEGWI
GTQYFTEQTAFRFTVPDGLFSDPDGDALQFSVRYPASADWKLPAWISFDAATRTFTGTPP
SSVGGQLFNFEVVATDTSGASMDIGFALIVNQAPEARQTIAAQSFKQGGAWNFKVPTTVF
VDDDKDALVYGATLANGAALPAWLTFDAQSQTFKAAANAPLGTYEISVSAKDPWGAQATQ
KFAVTVQSSTITGTSRNDTLTGTTGNDTIDGLAGADTMTGLAGDDTYIVDNTGDKAVEAA
NAGTDTVMSSVSFTLGANVENLVLAGSGAINGTGNELNNRLTGNAGANVLTGGAGADYLD
GGAGTDTLAGGLGNDTYWLARGYGTDTVQENDTTSGNLDIAKFANDVSSRQLWFRKSGNN
LEVSIIGTSDKLVMSNWYAGSQYQVERFQAGDGKALQANQVQSLVQAMASFSPPAAGQTS
LPANYQSSLETTLAANWK
NT seq
6357 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaacgacacgctggtgggcggcaacggcaacgacgcgctgatgggcggcgaaggc
cgggacacgctctacgggggcgctggccacgacacgctgatcggcggggcgggcgcggac
ctgctggacggcgggctgggcaacgacacctacgtgatcgacgcggccgatctgcccgag
gggtcgtcggacgcggcggaactgctgcgggacgcgggcggcgacgacaccgtcatgctc
tcgggcgcggtctcgtcctcccggaccgacaaggggcaggacctcgcgatgcgcatgggc
gaagtgtccgagcggcgggggctggtgctggagaacgggttcaccggcgcgttcgagacg
ctggtggtcaatggcgtgcaggtgtccaccgcgcggtggatccgggccaacgtaacggag
gacaagaacctcacggccgaagcgggcggcaaggcctacggcgggcgtggagcggatcgc
ctcagcctgggcgcgggcggcggcatgctgcaaggcgccgcgggcaacgacatcttcgac
atcgcccaggcgagggactctggcggcgccgtgctgaccttcgagcggggcgacggcctg
gataccgtgaccggcgcggtgagcgcgcagacgcaggccgctcgcgctgccaatgtgttc
gagttcggcgaaggcatcgcggcggacggcgtggcgctggtgcgcaagttcgatggacaa
ggcatggccctgtacctgcgctatggagacggcgacgacatggtgcgcctggacggactc
tcgggcagcgacgaccggccgttcgacctcgcacggttcgcggatggcagtgaactcgcg
tggaccgatctggtcgcgcgcggcatcgtgctggacatgcgcgagcgcaccgacggcaat
gcggggcgaggggatggcacgccctaccgcgacctcatcacgggccgcgacggcgccgac
cggatctacgcgggcgccggggacgatgtggtgacggccggggcgggcgacgaccagata
tggggtgacctcggcaacgacaccatcgatgccggagcgggcaatgacaccgtcgattcg
ggccaaggccgcgacaccttcttctacagccggggcgatggagtcgaccgctattccgcc
ggaatggccgcaccggcggatggcgatgtcatccggttcaaggaagggctcgcgcagtcc
gacctgatgttctcgcgcgtggaggacgacctgctggtgcgggtcatcggcacgcaggac
cgccttacggtaaaggcggcatttacctcgcagccgctgtcgcgcatcgagttcggtgac
ggacgcgctgtggcgttcgcggaccttgccctcacgccgggccaggcccaggcgaccgcg
ggcaacgattcggaaatccatctgctgcccacgggggacacggtggacgcgttggccggc
agcgacacggtctacggcggcgtgggcaacgacaccatcgatggaggtgagggagccgac
atgttgtacggcggtgcgggcgacgacgcgctgacggatgcgcgcggagacaacaccttc
gatgctggcgatggcaacgaccgcatcacgggcatgggcacttccgtggacgcgggcgct
ggcgacgacgtggtggaagtgccgggcgcacgcgtgaagctcggcacgggcagcgacacg
ctggtggtgcgcaggtcggccggtccggtgggcgctaccttgctggtggacggccagacc
cagaacggctctggccgcacggtccgcttcgccgcgggcctcaccccggcgcaggtgggc
atttccagcgtgccgggcgagggcggccgaaaggatctgctggtcacctgggctggtgag
ggaaatgcgggaacgcaggagttgcgcatcctcggcttcatggacttcgccgagggccag
cgcggcctccggttcgtgttcgatgatgcgccgcagactttgtggagctggggcgacgtg
ttcaaccgcgcgaactccggcacgcctggcgacgacgcgctccggggcacgccgggcgac
gatgaactgcgcggactggcgggcaacgacaccatcgacggcttggccggcaacgacatg
ctggatggcggggccggtgcggacaccctgcgcggtggtgacggcaatgatgtgctgatc
gcgggagagggcggtgccgcgggcagcgacacgctgtacggcgacgccggcgatgacatc
ctggttgcgtcgctgacgggtccgtctcaactgtccggcggcgcggggggggataccttc
cgcatcggaccctcgggcggtctgcacaccatcgtgcgcgacgatgccgaggcccgggac
gtactggagttcgatgccgcgatcacgccgggccaggtgtcggtggcgcatatggacggc
gcggcggttctgagcgtgagggatgtgcccactggagcactcaagacgacggtcgtgttg
tcggggttgttttccagcgggcagccggggggcgttgcgcaggtgcgcttcgcgggcgat
ccggccaccgtctggacgctgcaggatctgcagcgtcaggcactcgtgggcggggcgggg
cacgaccgactcacgggcttcgacttctcggacgaccgcttggtgggcggggcgggcgat
gacgtgctatcgggccggggcggcaacgacgtgctgtcgggcggtgcgggcttcgacacg
cttgcgggtggcgcgggcgatgacgcttacctcgtcggccggggcgacggccgcgacgtg
atcacggaagcgggcggctcggacacgctgcgctttggtgcggacatcgcggcggcggac
gtgcgcctggtccgtacctccagtgctccagcggacgccacggggcgtgccgcggcctat
ggggccacggattcgctcgtggtggtggtgcccggcgccggacaggtgtggattccgggc
ttcttcggcgcggatggcggcgtggaggtcttcgaattcagcgatggcacgcgctggaat
gcgcaggatatccagggccgcatcgtggacgcgcgcggcgcggccggtgcccagcagggc
acggctgcggacgacactttcaccgtcgaccaccccggcgataccgtggccgagggcgcg
ggtcagggcacggacaccatccgcagcgcggtctcctatgtgctgccgaccgacgtcgag
aacctcacgctcaccggcacgctcgacatcgcgggcgtcggcaacggcgcgaacaacgtg
atcgtgggcaacgcgggcagcaatgtgctcgatggcaaggagggcctggagcggctggaa
ggcggtgcgggcgacgacatctacgtggacatggcgggcgatgcctacgccatcaacaag
gacgagatcgtggagcaggcgaatggcggcaacgacacgctgctgctcgacgccaagagc
cgatccctcgcggacaacgtcgaaaacctcgtgctggtggactggacgaacaccacgcgc
gtcgtaccggtggactcctactacggttttcagtcttcctctctgttgtacgacggccgg
tccgacgacacccgggtgcggctgtcgggcaatgccctggacaacgtcatcgacgccacc
aatcaaggtcgcatcagcaccatgatgatgcgggatcgctccgatgcgttcggcggcctc
gtgctggatggcgctggcggcaacgacacgctgatcggtggcgtggaagacgacttctac
ctggtggacagcgcgggcgacaaggtagtcgagacgggggtcgatgccaatgggaaacag
gtttcagtcaacgacacgatcgtttcctccagcgtctccgtggacctgtcggccgtcgcc
aacgtcgagcatgtcgaactgctgggcgaccagaccttgagcgccactggcgacgaccag
gccaaccagatccgggcgtccaggaacaccgcgcgcaacgtgctcaccggcaggggcggc
gacgacacctactatgtgggactcaacgatgtggtggtggaggtggcgggcgggggaacg
gaccgggtcattctcgacgtggtggcgatgggccaggccgcatggcgatccaacggcaag
gtcttccgcctggacgactacgcgaacgtggaaaacctcgcggccaacggcagactgcgc
ggaagcgatcccgcgcaaggcgtgcacctgatcggcaatgccggtaacaacacagtgagc
ggctcattccaggacgacatcgtggaaggtggcgatggcgacgacgtcgtggaagaccaa
tatgcggccatccgccccgccgcggcgctctggtccgcgggccaggaccgtgacgaattg
aagggcggtgctggcaacgatcgcctggtgagctatgcgggcctggacacgatggacggc
ggtgccggaaacgatgtactggtgggcggcgacatctacctgttcggtcgcggcgacggc
cgcgatgtcatcgaatcatggacgggccgggtgagcggcgagcgcagccagacgctgcgg
ttcaagtcgggcgtcacggcacaggacgtggtgctgaggcgagacggggactccctggag
gtgtccctgcgcggctcgcaggatgccgtcaccgtgaagtccttctaccaagacgctgcg
gccagcggcgtgcggcgcatcgagttcgccgatggcacggcttgggagcgcgacaccctg
ctgcgccgcgcggatccgaatgcggtgaaccatgcaccggtgctggcggccccgctggcc
gatgcccgcgcgtcgacgggcgcggccttcagcttcacggtaccggtggaggctttcaag
gacgaggacgcgggcgacacgttgacctaccgcgccacgcgtgccgacggcagtgcgctg
ccgtcgtggctgggtttcgacgccgccacgcgcacgttcagcggtacaccggcccagggt
gatgtcggcgccatcgacgtgcaggtcacggcgaccgatgggttgggcgcggccgtgtcg
gacacgttctctctggtggtggacaagggcaaccgcgcgccagtcgcggagggctggatc
ggcacgcagtatttcacggagcagaccgcgttccggttcacggtgcccgatgggttgttt
tcggatccggacggcgatgcgctgcagttcagcgtgcgctatcccgccagcgcggactgg
aagctgccggcctggatttcctttgatgcggccacccgcacgttcacgggcacgccgccg
agcagtgtgggcggacagctcttcaacttcgaggtcgtggccaccgatacatcgggcgcg
tcgatggacatcggcttcgcgctgatcgtcaatcaggcgcccgaggcgcggcagacgatc
gcggcgcaatcgttcaagcagggcggtgcctggaacttcaaggtgccgacgaccgtcttc
gtggacgatgacaaggacgcgttggtctacggtgcgacgctcgcgaatggcgcggcgctc
ccggcctggctgactttcgatgcgcagtcgcagacgttcaaggccgcagcgaacgcaccc
ctgggcacctacgagatttcggtcagcgccaaggacccctggggagcgcaggcgacccag
aagtttgccgtcaccgtgcagtcgtccaccattacgggcacgtcccgcaacgacaccctg
acgggtacgaccggcaacgacacgatcgacggcctggcaggcgccgacaccatgaccggt
ctggcgggcgacgacacgtacatcgtggacaacacgggtgacaaggcggtggaagcggcg
aacgccgggaccgacacggtgatgtccagcgtgtctttcacgctgggggccaacgtggag
aacctcgtgctcgcgggctcgggagcgatcaacggcaccggcaatgagctgaacaaccgg
ctgacgggcaatgcaggcgccaatgtgctcacggggggcgcgggggctgactacctggat
ggcggcgccggcaccgacacgttggcgggaggtttgggcaacgacacctactggctcgct
cgtgggtacggcacggacacggtgcaggagaacgacaccaccagcggcaacctcgacatc
gccaagttcgcaaacgatgtgtcgtcgcgccaactgtggttccgcaagagcgggaacaac
ctggaggtgagcatcatcggtacgagcgacaaactggtaatgagcaactggtatgcgggt
tcgcagtaccaagtggaacgcttccaggctggcgatggcaaggcgctgcaggccaaccag
gtgcagagcctcgtgcaggcgatggcgtcgttctcgccgcccgcggcggggcagaccagc
ctgccggcgaactaccagagcagcctggagaccacgttggccgcgaactggaagtga
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