Xanthomonas citri pv. citri mf20: J172_02535
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Entry
J172_02535 CDS
T03781
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Pathway
xcf00040
Pentose and glucuronate interconversions
xcf01100
Metabolic pathways
xcf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J172_02535
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J172_02535
Enzymes [BR:
xcf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J172_02535
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AJZ09087
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Position
2765602..2766618
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AA seq
338 aa
AA seq
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MTTLAELQTALNAKSHHIIIRGKIYGGPKLTTLNFSSTIWNNITIEGAAGGGAALQNIQL
KFSGENLPAGINIQNVVIRNISFSGNIGDLQALPDQVKGTSNNTGINYVGVSLRRISNAW
IDHCDFYDISDDLLSVGMSSNYVTLSYNHFYFSNSWVNMNPDPVWNWVEKNYHDLANERL
AILIGHNKKDSYVYGGNKLHVTLHHNWFGPNLAGRPLLRGWVHAYNNYFDNSTSPNGERT
AADGRGYEKQQYNALQVGSGSIVFSESNYFYKTNNSNQIRLESDGDMYNFYEKENVYDAV
TGNSAIGSTFNNAPVKYSYEPDDSARVPGIVRSSAGPH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacacttgcagagctgcaaacggcactcaatgccaaaagtcaccatatcatcatc
cgtggaaagatctacggcggccccaaattgactaccctgaatttctccagcactatttgg
aacaacataacaatcgagggtgctgcaggcggtggagcggccttgcagaatatccaattg
aaatttagcggcgagaacttgcccgccgggataaacattcagaatgtggttatcagaaac
atctcattctctggcaatatcggcgacttgcaagccctgcctgaccaggtcaaaggaacg
tccaacaacactggcatcaactacgtaggcgtatcattgcggcgtatatccaatgcttgg
atcgaccattgcgatttctatgatattagcgatgaccttttatcagtcggcatgtcatct
aattacgtcacgctgtcgtacaatcacttttacttcagtaacagctgggtcaacatgaat
ccggatccggtatggaactgggtcgaaaaaaattaccatgacctcgcaaatgagcgctta
gcaatccttattggtcacaacaagaaagattcatatgtatatggcggcaataagctgcac
gtaacgctgcaccacaactggtttggccccaatcttgccgggcgccccttactgcgtggc
tgggtgcatgcctataataattactttgacaatagcacatcacctaatggtgagcgaacc
gctgccgatggtcgcggctatgaaaagcagcagtacaacgctttgcaggtaggtagcggc
agtattgttttttccgaatcaaactatttctacaaaaccaacaatagcaaccagattcga
ctagaatcagacggtgacatgtacaatttttacgaaaaagaaaacgtttatgacgcagta
acaggcaattcggcgatcggctcaaccttcaataatgcaccagtcaaatacagctacgag
cctgatgattcggcaagagtccccggaatcgttcggtcctctgcggggccgcactaa
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