Xanthomonas citri pv. citri mf20: J172_02553
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Entry
J172_02553 CDS
T03781
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcf03009
]
J172_02553
Enzymes [BR:
xcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
J172_02553
Ribosome biogenesis [BR:
xcf03009
]
Prokaryotic type
rRNA helicases
J172_02553
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
AJZ09105
UniProt:
A0A0U5G9Y9
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All DBs
Position
2784747..2786123
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AA seq
458 aa
AA seq
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MNEFSALPLSPALAPGIDALGYTVLTPIQAHSLPPILQGLDVIAQAPTGSGKTAAFGLGL
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
LLFSATFPDSIRTLARELLKEPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRETARAQALETEQ
GQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
AIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattctccgcgctgccgctgtcgccggccctggcccccggcatcgacgccctt
ggctacaccgttttgactcccatccaggcgcatagcctgccgccgatcctgcaggggctc
gatgtcatcgcgcaggcgccgaccggcagcggcaagaccgccgcgttcggactgggcctg
ctgcaaaagctcgaccccgcgctcacccgcgcacaggcgctggtgctctgccccacccgc
gaattggccgaccaggtcggcaagcagctgcgtaagctcgccaccggtatccccaacatg
aagctggtggtgctcaccggcggcatgccgctcgggccgcagctggcctcgctggaagcg
cacgacccgcaagtggtggtgggtacgcccgggcgcatccaggagctggcccgcaaacgc
gccctgcacctgggcggcgtgcgcacgctggtgctggacgaggccgaccgcatgctcgac
atgggcttcgaagaacccatccgcgagatcgccagccgttgcgacaaacatcgtcagagc
ctgctgttttcggccacgtttccggacagcatccgcacgctcgcacgcgagctgttgaaa
gagcccgtcgagatcaccgtggaaggcgccgatagcgcaccggagatcgatcagcagttc
ttcgaggtcgacccgacctatcggcaaaaggccgtcgccggcctgctgctgcgcttcaat
cccgaatccagcgtggtgttctgcaatacccgcaaggaagtggacgaggtggcgggttcg
ctgcaggaattcggcttctctgcacttgccttgcatggcgacatggaacagcgcgaccgt
gacgaagtgctggtgcgcttcgtcaaccgcagctgcaacgtcctggtggccagcgacgtg
gccgcacgcgggctggacgtggaagacctttccgccgtggtcaactacgagctgcccacc
gataccgaaacctatcgccaccgcattggccgtaccgcacgcgccggcaagcacgggctg
gcgctgagcctggttgccccgcgcgaaaccgcccgcgcgcaggcattggaaaccgaacaa
ggccagccgttgaaatggtcgcgtgcaccgctggccactgcgcgtccggcgcaactgccg
caggcggcaatgaccaccttgcgcatcgacggcggcaagaccgacaagctgcgcgccggc
gacatcctgggcgccctgaccggcgaagccgggctctcgggcgcggcaatcggcaagatc
gccatctaccctacccgctcctacgtggccattgcccgcgcgcaggtcgccaaggcgctg
gcacacctgcacgcaggcaagatcaagggacgccggtttcgggtcagcaagctctga
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