Xanthomonas citri pv. citri mf20: J172_02890
Help
Entry
J172_02890 CDS
T03781
Name
(GenBank) transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
xcf
Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcf03000
]
J172_02890
Transcription factors [BR:
xcf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
J172_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR_2
HTH_11
HTH_IclR
HTH_24
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AJZ09432
UniProt:
A0A0U5FFL4
LinkDB
All DBs
Position
3178710..3179636
Genome browser
AA seq
308 aa
AA seq
DB search
MNASLPPLAALRAFEAAARLQSVSRAAQELHVTHGAVSRHVRSLEQALGTALFARQGRGL
MLTAAGVRLRDATGEGFGVIGQAWAALQRPAAGAPLVLGCSGSLLARWVIPRLGLLQQEL
PDVRLHLSASEQPPGPDLDGLDAALLLDTPPWPGEWQVHALGVEWIGPVLSPQLASTLQI
EGSDPAVLGDHALLHTRSRPQAWPEWAQAHGLAPEALRFGTEFEHLVYLLEAAAAGLGIA
IAPQPLVAADLAAGRLLAPWGFAATHGRWVLCAAKRNPDPRIERLAGWLGRTLATDQHTS
STMNVAKN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttcgcttcccccgttggcggcgctgcgcgcgttcgaagctgccgcgcgcttg
cagagcgtcagccgtgctgcccaggaactgcacgtcacccatggcgccgtcagtcggcat
gtgcgttcgctggaacaggcattgggcaccgcgctgtttgcgcgccagggccgcggcctg
atgctgaccgctgcaggggttcggcttcgcgatgccaccggcgaaggctttggcgtgatt
ggtcaggcctgggcggcattacaacgcccggccgccggagcgccgctggtgctgggatgt
tcgggcagcttgttggcgcgctgggtgattccgcgcctgggactgctgcagcaagagctg
ccggacgtgcgcctgcatctgtcggccagcgaacagccgcctggaccggacctggacggt
ctggatgccgccctgctgctggacaccccaccctggccgggcgaatggcaggtgcacgcg
ctgggcgtggagtggattgggccggtgctgagtccgcagcttgcatcgaccttgcagatc
gaggggagcgacccggccgtgctcggcgatcacgcgctgctgcacacccgctcgcgcccg
caggcctggccggaatgggcacaggcgcacgggctggcacctgaggcgctgcgcttcggc
accgaattcgagcacctggtgtatctgctggaagccgctgccgctggcctggggatcgcg
attgcgccgcagccgttggtcgccgcggacctggcagccgggcgcctgctggcgccgtgg
ggattcgccgccacgcatggccgctgggtattgtgcgccgccaagcgcaaccccgatcca
cgcatcgaacggttggccggctggctgggtagaacactggcgacagaccagcacacctct
tcgaccatgaatgtggcgaagaactga
DBGET
integrated database retrieval system
