Xanthomonas citri pv. citri mf20: J172_03622
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Entry
J172_03622 CDS
T03781
Name
(GenBank) hydroxymethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Pathway
xcf00730
Thiamine metabolism
xcf01100
Metabolic pathways
xcf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
J172_03622
Enzymes [BR:
xcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
J172_03622
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
AJZ10159
UniProt:
A0A0U5BXT6
LinkDB
All DBs
Position
complement(4062372..4064249)
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AA seq
625 aa
AA seq
DB search
MNAAPTVLQQQAQSLSEAVTQPIPGSRKIFVRGSRADLQVPMREIALTRTPTLFGGEENP
PLSVYDTSGPYTDPRVAIDLAAGLAPLRAQWIAERGDTLALDGLSSSFGRGREHDARLDA
VRFPARRLPRVARQGANVTQMHYARRGIITPEMEYVAIRENQRLEAVTDASLRKQHPGQA
FGASIQQRITPEFVREEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEE
LTWDIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKE
NFLYTHFEDICQIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTKLAWQHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRW
DDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYANEHGVSEA
QALSTGMQEKSAQFVAQGAQVYRAT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcgcccaccgttttgcagcaacaagcccagtcgttgtcggaggctgtcacc
cagccgattcccggttcacgcaagatcttcgtgcgaggctcgcgcgcggatctgcaagtg
ccgatgcgcgagatcgcgttgacgcgtacgcccaccttgttcggtggcgaagagaatccg
ccgctcagcgtctacgacacgtccgggccttacaccgatccgcgggtggcgatcgatctg
gcagccggtctggcaccgctgcgtgcgcagtggattgccgagcgtggcgacacgctcgcc
ctggacggcctgagctccagcttcgggcgtggccgcgagcacgatgcgcgtctggatgca
gtgcgctttccggcgcggcgtctgccgcgggtcgcgcgccagggcgccaacgtcacccag
atgcattacgcgcgccgcggcatcatcacgccggaaatggagtacgtggcgatccgcgaa
aatcagcgcctggaagcggtgaccgatgcaagcttgcgcaagcagcatccgggccaggcg
ttcggcgcctcgatccagcaacgcattacaccggagttcgtgcgcgaagagatcgcacgc
ggccgtgcgatcttgcccaacaacatcaatcaccccgaaagcgagccgatgatcatcggc
cgcaatttcctgaccaagatcaatgccaacatcggcaacagcgcggtgtcctcaggcatt
gccgaagaagtcgagaagctggtgtggtcgatccgctggggcggggacacggtcatggat
ctgtccaccggcaagcacatccatgagacgcgcgagtggatcatccgcaactcgccggtg
ccgatcggcacggtgccgatctatcaggcattggaaaaggtcgatgggcgcgccgaagaa
ctcacctgggacatcttccgcgacaccttgatcgaacaggccgaacagggcgtggattac
ttcaccatccacgctggcgtgctgctgcgctacgtgcccctgaccgcaaagcgcgtgacc
ggcatcgtgtcgcgtggcggttcgatcatggccaagtggtgcctggcgcatcacaaagag
aactttctctacacgcacttcgaagacatctgccagatcatgaaggcctacgacgtggcg
ttttcgttgggcgatggcctacgccccggctgcattgccgatgccaacgacgcggcgcaa
ttcggcgagctggaaacgctgggcgagctgaccaagctcgcctggcagcacgatgtgcag
accatgatcgaaggtcccggccatgtgccgatgcaattgatcaaggaaaacatggacaag
cagctgcgcgaatgcggcgaggcgccgttctacaccctgggcccgctgaccaccgacatc
gcgccgggctacgaccacatcaccagcgcgatcggcgcggcaatgatcggctggttcggc
accgccatgctctgctacgtcactccgaaagaacacctgggcctgcccaaccggcaggac
gtgcgcgacggcatcatggcctacaagatcgccgcgcatgcggccgacctcgccaagggg
catccgggcgcgcaggtgcgcgacaacgccttgagcaaggcgcgtttcgagtttcgttgg
gacgaccagttccatcttggcctggatcctgaaaaggccaaggagttccacgatgagacc
ctgcccaaggacgcgcacaagctggcgcacttctgctcgatgtgcgggccgcacttctgt
tcgatgaagattacccaggacgtgcgtgattacgcgaacgagcacggcgtgagcgaggcg
caagcgctatcgacaggcatgcaggaaaagtccgcgcaatttgtcgcgcagggtgcacag
gtctatcgcgccacctga
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