Xanthomonas citri pv. citri mf20: J172_03737
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Entry
J172_03737 CDS
T03781
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Pathway
xcf00040
Pentose and glucuronate interconversions
xcf01100
Metabolic pathways
xcf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J172_03737
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J172_03737
Enzymes [BR:
xcf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J172_03737
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AJZ10273
UniProt:
A0A0U5FIV8
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Position
complement(4226039..4227172)
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AA seq
377 aa
AA seq
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MKPKFSTAAAASLFVGSLLLTGVAYADAALEVATTGWATQNGGTKGGSKAAAANIYVVKN
AAELKAALSASVGSNGRIIKVSGIIDISEGKPYTKTSDMKTRARLDVPTKTTLIGITSNA
EIREGYFYVKANDVIIRNITIENPWDPEPVWDPDDGSAGNWNAEYDGLTVEGASNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDIKKGANFVTVSYSAFKSHEKNNLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNAVYPFSYAHGVGKESK
IFSERNVFEISGVSSCDKIAADYGGSVYRDQGSLLNGKALSCSWNTNIGWTPPYTYNLLS
ADKVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcgacggcggccgccgcgtcgctgttcgttgggtcgttgctgctc
accggcgttgcctatgccgatgcggcgttggaggttgcaaccacgggttgggcgacccag
aacggcggcaccaagggcggctccaaagcagctgccgccaatatctacgtcgtcaagaac
gccgccgagttgaaagcagcattgagcgcaagcgtcgggagcaacgggcgcatcatcaag
gtcagcggcatcatcgatatcagcgaaggaaagccttacaccaaaacctcggacatgaag
acgcgcgcgcgtctggacgtgcccaccaagaccacgctgatcggcatcaccagcaacgct
gaaattcgcgaaggctatttttacgtcaaggccaacgacgtcatcatccgcaatatcacc
atcgaaaatccatgggacccggagccggtctgggacccggatgatggcagcgccggcaac
tggaatgcggagtacgacggcctgaccgtggaaggcgccagcaacgtgtgggtggaccat
gtcaccttcaccgatggccgccgtaccgacgatcagaatggcactgcaaatggtcgtccg
aaacagcaccacgatggcgcgatggacatcaagaaaggcgccaatttcgtcaccgtctcg
tactcggccttcaagtcgcacgaaaagaacaacctgatcggctccagcgacagcgcgtcc
agtaccgacagcggcaagctcaaggtcaccattcacaacaccctgttcgaaaacatttct
gcgcgcgccccgcgcgtgcgcttcggtcaggtgcacctgtacaacaactaccacgtcggc
agcaccagcaatgcggtgtatccgttctcctacgcgcatggcgtgggcaaggagtcgaag
atcttctccgagcgcaacgtgttcgagatcagcggtgtcagcagctgcgacaagatcgcc
gccgactacggtggcagcgtgtatcgcgatcagggttcgctgctcaacggcaaggcgctg
tcgtgctcgtggaataccaacatcggctggacaccgccctatacctacaatctgctatcg
gcagacaaggtcgctgcagacgtcaaggcgaaagcaggcgccggcaagctgtaa
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