Xanthomonas citri pv. citri mf20: J172_03975
Help
Entry
J172_03975 CDS
T03781
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xcf
Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcf03032
]
J172_03975
03400 DNA repair and recombination proteins [BR:
xcf03400
]
J172_03975
Enzymes [BR:
xcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J172_03975
DNA replication proteins [BR:
xcf03032
]
Prokaryotic type
DNA Topoisomerases
J172_03975
DNA repair and recombination proteins [BR:
xcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J172_03975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJZ10510
UniProt:
A0A0U5FJQ0
LinkDB
All DBs
Position
4477775..4480267
Genome browser
AA seq
830 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKN
EKHVEAIARAAKGADDIFLATDPDREGEAISWHIAEILKERGLLKDKPMQRVVFTEITPR
AIKEAMAKPRMIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIPREYWSIDAHCRHPSQAFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ
AAQGVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDE
GSVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKNAQEAHEAVRP
TSALRTPAQVARFLSEDERRLYELIWRRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDTKSSEDEDEGRKLPLMKAGDNVPLDRIVTDQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSGHFTRYVDYDF
TANLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKDSLDKTDAGSVRVLGTDPVSGKE
VSARIGRFGPMVQIGTVEDEDKPTFASLRPGQSIYSISLEDALELFKMPRALGQDKDQDV
SVGIGRFGPFARRGSTYASLKKEDDPYTIDLARAIFLIEEKEEIARNRVIKEFDGSDIQV
LNGRFGPYISDGKLNGKIPKDREPASLTFEEVQQLLADTGKPVRKGFGAKKATLKKNTVK
DSAPKKPAVKKTATKTAASKTAVKKAPAKKTATKKAAKRVVKKTVSKAAG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaataaatac
ctcggcaaggacttcaccgtcctggcctcgtatgggcacgtgcgcgacctggtccccaag
gaaggcgcggtcgatccggacaacggctttgcgatgcgttacgacctcatcgagaagaac
gagaagcacgtcgaagccatcgcgcgtgccgccaagggtgccgacgacatctttctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaggag
cgcggcctgctcaaggacaagccgatgcagcgggtggtgttcaccgaaatcaccccgcgt
gcgatcaaggaggcgatggccaagccacgcatgatcgccggcgacctggtggatgcgcag
caggcgcgccgcgcgctcgattacctggtcggcttcaatctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgctggccgcgtgcaatcgccggcgctgcgtatgatcgtc
gagcgcgaagaagagatcgaagccttcatcccgcgcgagtactggtccatcgatgcgcat
tgccggcatccctcgcaggcgttcaacgcgcgactgatcaagctggatgggcagaagttc
gagcagttcaccgtgaccgacggcgacaccgccgaggcggcgcgcctgcgcatccagcag
gccgcgcaaggcgtgctgcatgtcaccgacgtggccagcaaggagcgcaagcgccgccct
gccccgccgttcacgacctccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagttgtacgaaggcgtggcactcggcgacgaa
ggctcggtcggtctgatcagctatatgcgtaccgactcggtgaacctgtcgcaggacgcc
ctggcggaaatccgcgatgtgatcgcgcgcgacttcggcaccgcttcgctccccgaccag
cccaacgcctacaccaccaaatccaagaacgcgcaggaagcccacgaagcggtgcgcccg
acctccgcgctgcgcaccccggcgcaggtggcgcgtttcctgtccgaggacgagcgccgc
ctgtacgagctgatctggcgccgcgcagtggcctgccagatgattccggccacgctcaat
accgtcagcgtggatctgtcggccggcagcgagcacgtgttccgcgccagcggcaccacc
gtggtggtcccgggcttcctggccgtgtacgaagaaggcaaggacaccaagagcagcgag
gacgaggacgaaggccgcaagctgccgctgatgaaggccggcgacaacgtcccgctggac
cgcatcgtcaccgaccagcacttcacccagccgccgccgcgtttcaccgaagcggcgctg
gtcaaggcgctggaggaatacggcatcggccgtccctccacctacgcctcgatcatccag
accctgcagttccgcaaatacgtcgagatggaaggccgcagcttccgtcccaccgacgtg
ggccgtgcagtgtccaagttcctgtccgggcatttcacccgctacgtcgattacgacttc
accgccaatctggaagacgatctggacgcggtgtcgcgcggcgaagccgagtggatcccg
ttgatggagaagttctggggcccgttcaaggaattggtcgaagacaagaaagactcgctg
gacaagaccgatgccggcagcgtgcgcgtgctcggcaccgacccggtcagcggcaaggaa
gtcagcgcgcgcatcggtcgcttcggcccgatggtgcagatcggcacggtcgaagacgag
gacaagcccaccttcgcgtcgctgcgtccgggccagagcatctattcgatctccctcgaa
gatgcgctggaactgttcaagatgccgcgcgcgctgggccaggacaaggaccaggatgtc
agcgtgggcatcggccgtttcggcccgttcgcgcggcgcggcagcacctatgcctcgctg
aagaaggaagacgacccctacaccatcgacctggcgcgcgccatcttcctgatcgaagag
aaggaagagattgcacgcaaccgggtgatcaaggaattcgacggcagcgacatccaggtg
ctcaacggccgcttcggcccctacatcagcgacggcaagctcaatggcaagatccccaag
gaccgtgagccggcgtcgttgacgttcgaagaagtgcagcagctgctggccgacaccggc
aagccggtgcgcaagggcttcggcgccaagaaggccaccctgaagaagaatacggtcaag
gattcggcgccgaagaagcctgccgtcaagaagaccgcgaccaagaccgcggccagcaag
accgctgtcaagaaggcgccagccaagaagacggccaccaagaaggccgccaagcgcgtg
gtcaagaaaaccgtgagcaaggccgcgggctga
DBGET
integrated database retrieval system
