Xanthomonas citri pv. citri mf20: J172_03992
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Entry
J172_03992 CDS
T03781
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
xcf
Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcf03021
]
J172_03992
Transcription machinery [BR:
xcf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J172_03992
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
IF2_N
HTH_11
KORA
HTH_10
UCR_14kD
HTH_3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AJZ10527
UniProt:
A0A0U5FL57
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Position
complement(4498010..4498894)
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AA seq
294 aa
AA seq
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MVPMNQTTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQDLARRFRDELDLDAA
RELVHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIR
AEMHEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVME
MESRLSGRDIGFDASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNQLQLLREGMA
GLDARSRDIVKRRWLDSDSKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctatgaaccagactacctcgactgcccttgtggcaaacaatctcccgattccc
agtgcgctcggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcg
gtcgatgaggagcaggatctggcccgtcgctttcgcgacgagctggatctggacgccgcg
cgcgaactggtccattcccacctgcgcttcgtggtgcacgtggcccgcggctacaacggc
tacggcctgccgctgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtc
aagcgcttcgacccggacatgggcgtgcgcctggtcagcttcgcggtgcactggatccgt
gccgagatgcacgagttcatcctgaagaactggcgcatcgtcaaggtcgccacgaccaag
gcgcagcgcaaactgttcttcaacctgcgcaagtccaagacgcgtctgggctggctcaat
gcgtcggaagtgactgcggttgccaaggacctgaacgtctccgagcgtgaggtgatggaa
atggagtcgcgcctgtccggtcgcgacatcggtttcgacgcgtcgtcggacgaagacgac
gatcacggcccgccgtcgccggtgagctacctggtcgccaatgaagaagatccgtcgcag
gcgtacgagcgtcacgacagcgaagacaaccagctgcagctgctgcgcgaaggtatggct
ggcctggacgcgcgctcgcgcgacatcgtcaagcgccgctggctggattccgattccaag
gtgacgctgcaggaactggcagacgaatacggcgtgtcggccgagcgcatccgtcagatc
gaagcgaatgcgctgaagaagatgaaggcgctgttcgtcgcctga
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