Xanthomonas citri pv. citri mf20: J172_04375
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Entry
J172_04375 CDS
T03781
Name
(GenBank) autotransporter secretion inner membrane protein TamB
KO
K09800
translocation and assembly module TamB
Organism
xcf
Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:
xcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcf02000
]
J172_04375
Transporters [BR:
xcf02000
]
Other transporters
Pores ion channels [TC:
1
]
J172_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
US30
Rv3651-like_C
Motif
Other DBs
NCBI-ProteinID:
AJZ10901
UniProt:
A0A0U5FPW1
LinkDB
All DBs
Position
complement(4946881..4950735)
Genome browser
AA seq
1284 aa
AA seq
DB search
MSAPSPTPPAPRPRFYRRRRFWVGSGLTVLGLVLLALIAIYWLLQTVAGRDVLLAQVTAR
LPVGATFTYGKVEGPVAGPLTLRDVDFHYQDIHFTAERVYLEPDLRPLLGRKLQLDAVQV
SNATLNLGKSEEPFTLPSWPESLPQINVPLAIQADKIDVQNLRITQLQQPMIVLHKVQGG
LDVATGELRTRDLVIDTDMGDFRLHGDYLPNDDYRADLTATAVLPAARGRTPASLGLVAR
GDLDKMEVAIAGRAPAPLQASLVFTGRDDPTWAFKAVTEALDTSLLIPAAEGQANPPATP
IALNLQASGKGGNADLHGSLKQGELSATLQPSHIALADQVLTVEPLVIDTFEGRTQLRGT
ADFRDTQNPSFRFAVNASGLRFTPAADPATPDAPLVPVELQDARLGVAGTLKAWAAIGRA
TVERDGQQAELVFDSRGNDRGAQLKQVQAKTPGGSLDLTGEVAWAPALQWDVSAQLAKFD
PGYFAPGWNGNLSGKIASKGRQLPAPAGGVSPGFEATAEIPSLTGQLRQRALSGNGKFAL
RGQQGEGELQLALGNSRINAKGKVGDQLDIAAQLQPLQLDDVLPGATGVVRGQLQVSGKR
DAPDITADIAGNGLRWDTYSAQNISLRGRLPWRGSDGQLALQGTAIEAGVVLDSVRVQAR
GAVEALRLDADIANSMASVALQGDVRRNGERWQGQVATLRIAPAKGDAWSLRQPAQFSTD
GAAFTLSDTCLGAATGGALCASANWPREGMVVHGDALPLSLVQPWLPKQEGRQIYLRGEL
SLDGSFKPRGNAWEGSLRIASPEGGIRLGETRYAAVAGNPNRGELLRYDQFSVQADFTQQ
QIQGKLGIGFQGAGFVDAKFNTGWDAYAPLNGELYLNMSRLYWLELVIADVVRPKGLVEG
HVSLRGTRDKPLLGGDATLSDFTAEYPSMGLTLSEGKGRFDALPDGSAKITASAKSGPGT
LTVDGGLSWFGTSTPLLLNIRGDNVLAYNTSELRIIANPDMQFGITDNTMQLRGKVTVPE
ADIDLERLDRGTSVSEDVVVLDPVDPEQTPASPLDMDLAIVLGDKVNMSGFGLKGGLSGQ
MQIRARPGREMTANGGLDVRGRYKAYGQDLTITRGQLTWNNNIVSDPRVSLRAERKIGDV
TAGIDVSGRAESPRADVWSEPAMSQSEALSYLVLGRGLSTASSDETQQVSAASAALSAGS
SLIASQIGAKLGLDEAGVSQSSTLGSVVGFGKYLSPKLYVGYGVSMVGGGSVLTLKYLLS
RGFDIEAESSTIETKGSVNWRREK
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcaccctcacctacgccgccggcaccgcgcccgcgcttctatcgccggcgccgg
ttctgggtgggctcgggcctgaccgtgctcgggctggtgctgctggccttgatcgcgatc
tactggctgctgcagaccgtggccgggcgcgatgtgttgctggcacaggtcaccgcgcgc
ctgccggtgggcgccacctttacctatggcaaggtcgaaggcccggtagccggcccgctg
accttgcgcgatgtggatttccattatcaggacatccacttcactgcagagcgcgtgtat
ctggagccggacctgcgcccgctgctggggcgcaagctgcagctggatgcggtgcaggtg
agcaatgccacgttgaacctgggcaagagcgaggaaccgttcaccctgcccagctggccc
gagtcgctaccgcagatcaatgtgccgctggcgatccaggccgacaagatcgatgtgcag
aacctgcgcatcacccagctgcagcagccgatgatcgtgctgcacaaggtgcagggcgga
ctcgatgtggctacgggcgagctgcgcacgcgcgatctggtgatcgacaccgacatgggc
gacttccgcctgcacggcgattacctgcccaacgacgattaccgtgccgacctgaccgcc
actgcggtgctaccggccgcacgcgggcgcaccccggccagcctggggctggtggcacgc
ggggatctggacaagatggaagtagccatcgccggccgggcgccggcgccgctgcaggcc
agcctggtgttcaccggccgcgacgacccgacctgggcgttcaaggccgtgaccgaagca
ctggatacctcgctgttgattccggccgccgagggtcaagccaatccgccggccacgccg
atcgcgctgaacctgcaagcctccggcaagggtggcaacgccgatctgcacggcagcctc
aagcaaggcgagctgagcgccacgctgcagccttcgcatatcgccctggccgaccaggtc
ctcaccgtcgaaccgttggtgatcgacaccttcgaaggccgcacgcaattgcgtggtacc
gccgatttccgcgacacccagaatccgagtttccggtttgcagtcaacgccagcggcctg
cgcttcaccccggccgcggatccagccacgcccgacgcgccgctggtgccggtggagttg
caagacgcgcgcctgggcgtggccggcacgttaaaggcctgggccgcgatcggccgcgcc
accgtggagcgcgatggtcagcaggccgagttggtcttcgacagccgtggcaacgaccga
ggtgcacagctcaagcaggtgcaggcgaaaaccccgggcggctcgctggatctcaccggt
gaagtggcttgggcgccggcgctgcaatgggatgtcagcgcgcaacttgccaagttcgat
ccgggttatttcgcgccgggctggaacggcaacctgtccggcaagatcgcgtccaaaggt
cgccaattgccggccccagccggcggcgtctcgccggggttcgaggccactgcggaaatt
cccagcctgaccgggcagctgcgtcaacgcgcgctgtcgggcaatggcaagttcgcgttg
cgcggccaacagggcgaaggcgaactgcagctggcgctgggcaatagccgcatcaacgcc
aagggcaaggtgggcgaccagctcgatatcgccgcgcagctgcagccgttgcagctggac
gacgtgctgcccggcgccaccggcgtggtgcgcgggcagctgcaggtcagcggcaagcgc
gacgcacccgacatcaccgccgacattgccggcaacggcctgcggtgggacacctatagc
gcccagaacatcagcctgcgtggccggctaccgtggcgcggcagcgatggccaactggcc
ttgcaagggaccgccatcgaagccggtgtggtgctcgacagcgtgcgcgtgcaggcgcgc
ggcgcggtggaggccctgcggctggatgccgacatcgccaacagcatggccagcgtcgcc
ctgcagggcgatgtgcgtcgcaacggcgagcgttggcagggccaggtcgcaacgctgcgc
atcgcaccggccaagggcgatgcctggtcgctgcgccaaccggcgcagttcagcaccgat
ggcgccgcgtttaccttgtccgacacctgcctgggcgcggccaccggcggcgcactgtgc
gccagcgccaattggccgcgcgagggcatggtggtgcacggcgacgcattgccgctgtcg
ctggtgcagccgtggctgcccaagcaggaaggtcggcagatctatctgcgtggcgaactg
tcgctggacggcagcttcaagccacgcggcaatgcctgggaaggcagcctgcgcatcgcg
tcgcccgaaggcggcattcgtttgggcgaaactcgttacgctgcagtggccggcaatccc
aatcgcggcgagttgctgcgctacgaccaattcagcgtgcaggccgatttcacccagcaa
cagatccagggcaagctcggtatcggtttccagggcgccggctttgtcgatgccaagttc
aataccggctgggatgcgtacgcgccgctcaacggcgagctgtatctgaatatgtcgcgg
ctgtactggcttgagctggtgattgccgacgtggtgcggccgaaggggttggtcgaaggc
cacgtgagcctgcgcggcacccgcgacaaaccgctgctcggcggcgatgcgaccctgagc
gatttcaccgccgaatacccgtcgatgggtttgacgctgagcgagggcaagggccgcttc
gacgcgttgccggatggttcggccaagatcaccgcctcggccaagtccggtcccggcacg
ctcaccgtcgatggcggattgtcgtggttcgggaccagcaccccgctgctgctcaatatc
cgcggcgacaacgtgctggcctacaacaccagcgagctgcgcatcatcgccaacccggac
atgcagttcggcattaccgacaacaccatgcagttgcgcggcaaggtcaccgtgcccgaa
gcggatatcgacctggaacgcctggaccgtggcacctcggtgtccgaagacgtggtggtg
ctggacccggtggacccggaacagacgcccgcatcgccactggatatggacctggcgatc
gtgctcggcgacaaggtcaacatgagcggcttcggcctcaagggtgggctgagcgggcag
atgcagatccgcgcgcgccctggccgcgaaatgaccgccaatggcgggctggatgtgcgt
gggcgctacaaggcttatggccaggatctgaccatcacccgtggccagctgacctggaac
aacaacatcgtctccgacccgcgcgtgagcctgcgcgccgaacgcaagatcggcgatgtc
accgccggcatcgacgtcagcggccgcgccgaatcgccgcgtgccgatgtgtggtccgag
ccggcgatgtcgcaatccgaagcgctttcgtacctggtcctgggccgcggcctgtccacc
gccagcagcgacgaaacccagcaggtcagcgccgcctcggcggcactatcggccggcagc
agcctgatcgcctcgcagatcggcgccaagctcggcctggacgaagctggcgtcagtcaa
tccagcacgttgggctcggtggtcggtttcggcaagtatctctcgcccaaactctacgtc
ggctacggcgtgtcgatggtcggcggcggctcggtactgacgctcaaatacctgctcagc
cgcggcttcgatatcgaagccgaatccagcaccatcgagaccaaggggtcggtgaactgg
cggcgggagaagtag
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integrated database retrieval system
