Xanthomonas citri subsp. citri Aw12879: XCAW_00419
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Entry
XCAW_00419 CDS
T02519
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xci03032
]
XCAW_00419
03400 DNA repair and recombination proteins [BR:
xci03400
]
XCAW_00419
Enzymes [BR:
xci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XCAW_00419
DNA replication proteins [BR:
xci03032
]
Prokaryotic type
DNA Topoisomerases
XCAW_00419
DNA repair and recombination proteins [BR:
xci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XCAW_00419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AGI06238
LinkDB
All DBs
Position
505797..506984
Genome browser
AA seq
395 aa
AA seq
DB search
MKAKRVLRNATVAASTAGKLAAVATGAAVATAAVASAAAVAQAKATARAAGLTYVNDQQP
GISRRKAGKSFSYRDADGQRIADAETLQRIRSLAIPPAYTEVWICAKPNGHLQATGRDAR
RRKQYRYHADWALVRGEGKFERVIAFGTALPKLRRRLRRDLLLPGFPREKVLAIVVALLA
DTLVRVGNAEYARSNRSYGLTTLRNRHMEFLKGGRARLKFRGKSGQDHDIEVDDKQLVKL
IRQCQQLPGQSLFQYRDDDGQLQPVDSGEVNDYLREAMGEDFTAKDFRTWGGTLAALQRL
ARLPLPERSSERALTQVQNDVIREVADALGNTPSVCRKAYIDPCVFEGWRAGQLQAMATG
VRGERQWEAATLRFLSASRSKLKAQAKPASKRKSA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaacgtgttcttcgcaatgccacagtggccgccagtaccgccggcaagctc
gcggcggtcgccaccggcgcggctgtcgccacagccgccgtggcaagcgcggcagcggtg
gcgcaggccaaggcgaccgcgcgagcggccgggctgacctatgtcaacgatcaacagccc
ggcatcagccgccgcaaggccggcaagagcttcagttaccgcgatgccgacgggcaacgc
attgccgatgccgagaccttgcagcgcatccgttcgctggcgattccgccggcctatacc
gaagtgtggatctgcgccaagcccaatggccatctgcaggccaccgggcgcgatgcgcgg
cggcgcaagcaataccgctatcacgccgattgggcgctcgtgcgtggcgaaggcaagttc
gaacgcgtgatcgccttcggcaccgcgctgcccaaactgcggcggcggttgcgtcgcgat
ctgctgctgccgggatttccacgcgaaaaggtgttggcgatcgtggtggcgttgctggcc
gacaccctggtgcgcgtcggcaatgccgaatacgcgcgcagcaatcgttcgtacggactg
accacactgcgcaaccggcacatggaatttctgaaaggcggacgcgcgcggctgaagttc
cgcggcaagagcggccaggaccacgatatcgaagtggacgacaagcagctggtcaaactg
atccggcaatgccagcagctgccggggcaatcgctgttccagtaccgcgacgacgatggc
cagttgcagccggtggattcgggtgaggtcaacgactatctacgcgaggcgatgggcgaa
gacttcaccgccaaggatttccgcacctggggcggcaccttggctgcattgcagcggctg
gcacgcctgccattgcccgagcgtagcagcgaacgcgcgttgacgcaggtgcagaacgat
gtcatccgtgaggtagccgatgccttgggcaacacgccctcggtgtgtcgcaaggcctac
atcgacccatgcgtcttcgaaggctggcgtgcgggccagctgcaggccatggccaccggt
gtgcgtggcgagcgccagtgggaagcggccacgctgaggttcttgagcgcttcgcgtagc
aagctcaaggcacaggcaaagccggcgtcgaagcggaagtccgcatag
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