Xanthomonas citri subsp. citri Aw12879: XCAW_01179
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Entry
XCAW_01179 CDS
T02519
Symbol
himA
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xci03032
]
XCAW_01179 (himA)
03036 Chromosome and associated proteins [BR:
xci03036
]
XCAW_01179 (himA)
03400 DNA repair and recombination proteins [BR:
xci03400
]
XCAW_01179 (himA)
DNA replication proteins [BR:
xci03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XCAW_01179 (himA)
Chromosome and associated proteins [BR:
xci03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XCAW_01179 (himA)
DNA repair and recombination proteins [BR:
xci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XCAW_01179 (himA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Lmo2446-like_N
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AGI06987
LinkDB
All DBs
Position
1324955..1325227
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AA seq
90 aa
AA seq
DB search
MNKTELIDGVAAAADISKAEAGRAVDAVVSEITKALKKGDAVTLVGFGTFQVRERAERTG
RNPKTGDSIKIAASKNPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccgaattgatcgatggcgttgccgctgccgctgacatctccaaggctgaa
gctggccgtgctgttgacgcggttgtgagcgaaatcaccaaggcactgaagaagggcgac
gccgtcaccctcgttggcttcggtaccttccaggtccgcgagcgcgctgagcgcaccggc
cgcaatccgaagaccggcgacagcatcaagatcgctgcttcgaagaatcctgcattcaag
gctggtaaagccctgaaggatgcagtaaactaa
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