Xanthomonas citri subsp. citri Aw12879: XCAW_01236
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Entry
XCAW_01236 CDS
T02519
Symbol
pspF
Name
(GenBank) Transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xci03000
]
XCAW_01236 (pspF)
Transcription factors [BR:
xci03000
]
Prokaryotic type
Helix-turn-helix
Other families
XCAW_01236 (pspF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
HTH_23
AAA
nSTAND3
HTH_17
HTH_Tnp_1_2
AAA_7
ATPase
Motif
Other DBs
NCBI-ProteinID:
AGI07038
LinkDB
All DBs
Position
complement(1372329..1373927)
Genome browser
AA seq
532 aa
AA seq
DB search
MRSPTLPETADASLPIIWTVSVSRLTGLLADVIPEFDQRARIEQINLGFAEAVEVIGQRL
RRERCDALVAGGSNAAYLRSRLALPLAPIQATGFDLMEALARARRIAPRIGVVTHATDVP
SFHAFQHSFDLEIEHRRFVTAEDARDCIADLRASGIQVIVGTGMAIDFAEQAGLPGVLLY
SADSVRHALEQAITLGTAPGTDRVAGRTATRRARRADALLGDDSAMLHVRELVQLYAPHA
GTVLISGETGTGKELVARQLHAGSRRRGRFVAINCGAISESLLEAELFGYSDGAFTGARR
GGHTGLIETAQDGTLFLDEIGELPMPLQTRLLRVLEEREVLRVGATIPVAIDVRVVAASL
QELQQLVEQGRFRRDLFYRLAALRIALPPLRDRHHDIALLLAHYFQQLGSIPSPLSPAAL
QRLQQHTWPGNVRELRNLVERLCIHWKAQAHDSLSLEQLERWAPELFDTPADNRGAPREH
ADLATSRLQLTASAVRVALDRANGNRALAAQALGVSRTTLWRWMQAQAAARA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccctactcttccggaaaccgcggacgcttccttgcccatcatctggaccgtc
agcgtctcgcgcctgaccggcctgctggccgatgtcatccccgagttcgaccagcgcgca
cgcatcgagcagatcaacctcggctttgccgaagcggtcgaggtcatcggccagcggctg
cgacgcgagcgctgcgacgcgctggtggcgggcggatccaatgcagcgtacctgcgcagc
cggctcgcgctgcccttggcgcccatccaggccaccgggttcgatctgatggaagcgctg
gcgcgggcgcgccgcattgcgccgcgcatcggcgtggtcacccatgccaccgatgtgccg
tcgtttcacgccttccagcacagcttcgacctggagatcgaacaccgccgtttcgtcacc
gccgaagacgcacgcgattgcatcgccgatctgcgcgccagcggcatccaggtcattgtc
ggcaccggcatggcgatcgacttcgccgagcaggccgggctgcctggcgtgctgctgtat
tcggccgattcggtgcgtcatgcgctggaacaggccatcacgctgggcactgctccaggc
acggatcgcgttgccggccgtaccgccacgcgccgcgcacgacgggccgacgccctgctg
ggcgacgacagcgcaatgctgcacgtgcgcgagttggtgcagctgtacgcaccgcatgcc
ggcaccgtgttgatcagcggcgaaaccggcaccggcaaagaactggtcgcgcgtcaactg
catgccggcagtcgccgccgcggccgtttcgtggcgatcaattgtggcgccatcagcgaa
tcgttgctggaggcggaactgttcggctacagcgacggcgccttcaccggagcccgccgc
ggcggccacaccggcctgatcgaaaccgcgcaggacggcacgctattcctcgacgaaatc
ggcgagttaccgatgccgctgcaaacgcggctattgcgcgtattggaagagcgcgaagtg
ctgcgtgtcggcgcaaccatacccgttgcgatcgacgtgcgcgtggtcgccgccagcctg
caggaactgcagcagttggtcgaacaaggccgcttccgccgcgacctgttctatcgcctt
gccgcgctgcgcattgcactaccgccgttgcgagaccgccaccacgacatcgccctattg
cttgcgcattatttccagcaactcggcagcattccatcgccgctatcgccagctgcattg
caacgcctccagcaacacacctggcccggcaacgtgcgcgaactgcgcaacctggtcgaa
cgcctgtgcattcactggaaagcccaagcgcacgacagcctgagcctggagcaactcgaa
cgctgggcgccggaattattcgatacgcctgccgacaaccgcggcgcaccacgtgagcat
gccgatttagcgacctctcgcctgcagctcactgccagtgcagtccgcgtcgcgctcgac
cgcgccaacggcaaccgcgcccttgccgcgcaagcgctcggcgtctcgcgcaccacgctg
tggcgctggatgcaggcgcaggcggcggcgcgtgcatag
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