Xanthomonas citri subsp. citri Aw12879: XCAW_01395
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Entry
XCAW_01395 CDS
T02519
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci03030
DNA replication
xci03430
Mismatch repair
xci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XCAW_01395 (holA)
03430 Mismatch repair
XCAW_01395 (holA)
03440 Homologous recombination
XCAW_01395 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xci03032
]
XCAW_01395 (holA)
03400 DNA repair and recombination proteins [BR:
xci03400
]
XCAW_01395 (holA)
Enzymes [BR:
xci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XCAW_01395 (holA)
DNA replication proteins [BR:
xci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XCAW_01395 (holA)
DNA repair and recombination proteins [BR:
xci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XCAW_01395 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AGI07197
LinkDB
All DBs
Position
1568086..1569114
Genome browser
AA seq
342 aa
AA seq
DB search
MELRPEQLAGQSSQPLQPVYLIAGPETLRVLEAADAVRARARAEGIGEREVFDADGREFD
WNQLDASFNAPSLFSPRRLVEVRLPSGKPGKDGAEVISRFCANPPPDVVLLITANDWSKA
HHGKWAEAVGRIGTIAVAWAIKPHELSDWIERRLRAHGLRADAAAVQRLSERVEGNLLAA
AQEIDKLALLADGKTLDLEAMESLVADAARYDVFRLAETTFSGQPAAVIRMLAGLRGEGE
AVAALMPILIKELLRTASLAKVQANGGNLAAEMKAQGLWESRQAPFKRALQRHPEPHRWE
RFVAEAGLVDRMAKGRADGDAWVGLERLLVAVAEARAVRLLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgcccagagcagctggccggccagtccagccagccattgcagccggtgtat
ctgatcgccggccccgagaccttgcgtgtgcttgaggccgccgatgcggtgcgcgcgcgc
gcgcgcgccgaaggcatcggcgaacgcgaagtgttcgatgccgatggccgcgagttcgac
tggaatcagcttgacgccagcttcaatgcgcccagcctgttcagtccgcgccgcctggtc
gaagtgcgcctgcccagcggcaagcccggcaaggacggggccgaggtcatcagccgcttc
tgcgccaacccgccgccggacgtggtgctgctgatcaccgccaacgactggagcaaggcg
catcacggcaagtgggcggaggcggtcggccgcatcggtaccatcgcagtggcttgggcc
atcaaaccgcacgaactgtccgactggatcgagcgccgcctgcgcgcgcacggcctgcgc
gccgacgccgctgccgtgcagcgcctgagcgagcgggtggaaggcaacctgctcgccgcc
gcgcaggaaatcgacaagctcgccctgttggccgacggcaagacgctggatctggaggcg
atggaatcgctggtggccgatgccgcgcgctacgacgtgttccggctggccgaaaccact
ttttccgggcagccggccgcggtgatccgcatgcttgccggcctgcgcggcgaaggcgag
gcggtcgccgcgctgatgccgatcctgatcaaggaactgctacgcaccgcgtcattggcg
aaggtgcaggccaacggcggcaacctggctgccgaaatgaaggcacaggggctgtgggag
tcgcgccaggcgcccttcaagcgcgcgctgcagcgtcaccccgaaccgcaccgctgggaa
cgcttcgtcgctgaagccgggctggtcgatcgcatggccaagggccgcgccgacggcgat
gcctgggttggtctggaacgcctgctggtggccgtggccgaagcccgcgcggtgagattg
ttggcgtga
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