Xanthomonas citri subsp. citri Aw12879: XCAW_01492
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Entry
XCAW_01492 CDS
T02519
Symbol
truB
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xci03016
]
XCAW_01492 (truB)
Enzymes [BR:
xci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XCAW_01492 (truB)
Transfer RNA biogenesis [BR:
xci03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XCAW_01492 (truB)
Prokaryotic type
XCAW_01492 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AGI07292
LinkDB
All DBs
Position
1682210..1683136
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AA seq
308 aa
AA seq
DB search
MKPRIVYRPLHGILLLDKPSGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLGSAKAYDAEIVLGVTTDTDDADGESLRERAVPDLSEADLQAALAPFIGRIQ
QQAPIYSALKQGGEPLYAKARRGERIEAPVREVDVQAIEVLGYGAPRLRLRVTCGSGTYI
RSLARDLGEALGCGAHIASLRRLWVEPFRAPQMITLEALSAVLEAGAEAQTLLLPIEAGL
ADFARIVLDQTRAARFRMGQRLRDAAFPTGQVAVFGPDGTPSGLGLVDADGRLSPQRLFN
GLNEIPAC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccccgcatcgtctaccgcccgttgcacggcatcctgctgctggacaagccgtcg
gggctgagctccaacaatgcactgcaggccgcacgccggttattgcgtgcagagaagggc
ggccataccggcagcctggatccgctggccaccggcctgttgccgctctgttttggcgaa
gcgaccaagatcgccggactgctgctcggttcagccaaggcgtacgacgccgagatcgtg
ttgggcgtcaccaccgacaccgacgatgccgacggcgagtcgctgcgcgagcgtgcggtg
ccggatctgagcgaggccgatctccaggcggcgctggcgcctttcatcggccgtatccag
caacaggcgccgatttattccgcgctcaagcagggcggcgagccgctgtacgccaaggcg
cgacgcggcgaacgtatcgaagcgccggtgcgcgaggtggatgtgcaggcgatcgaggtg
ctgggctacggcgccccacgtctgcgcctgcgcgtgacctgcggttcgggcacgtatatc
cgcagcctggcgcgtgacctgggcgaggcgctgggatgtggagcgcacatcgcctcgctg
cgtcggctgtgggtggagccgtttcgcgctccgcagatgatcacgctggaggcgttgtcg
gcagttttggaagcgggtgccgaggcgcagacactattgctgccgatcgaggccggcctg
gccgattttgcgcgaatcgtgctcgatcaaacccgcgcggcgcgttttcgcatgggccag
cgcttgcgtgatgccgcatttccaacggggcaggtggccgtattcggacctgacggaacc
ccctcgggactaggcctggtggacgccgacgggcgcttgtcgccacaacgattattcaat
ggactgaacgaaattccggcctgttaa
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integrated database retrieval system
