Xanthomonas citri subsp. citri Aw12879: XCAW_01785
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Entry
XCAW_01785 CDS
T02519
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
XCAW_01785 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xci03019
]
XCAW_01785 (orn)
03009 Ribosome biogenesis [BR:
xci03009
]
XCAW_01785 (orn)
Messenger RNA biogenesis [BR:
xci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XCAW_01785 (orn)
Ribosome biogenesis [BR:
xci03009
]
Eukaryotic type
Pre-60S particles
RNases
XCAW_01785 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2252
Motif
Other DBs
NCBI-ProteinID:
AGI07576
LinkDB
All DBs
Position
complement(1985022..1985606)
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AA seq
194 aa
AA seq
DB search
MAENLAGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHPLETLEA
MDEWNRNQHRRSGLWQRVIDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLH
RQMSRLERYFHYRNLDVSTIKELARRWAPTVANGFAKSSAHTALSDVRDSIDELRHYRQF
MGALGGDTAAGVEN
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaccttgcaggcaacgaccgactgatctggatcgatctggaaatgaccggc
ctggataccgatcgcgattccatcatcgagatcgccaccatcgtgaccgatgcgcagttg
aacgtgcttgccgagggaccggaactggccattgcgcatccgctggaaaccctggaagcg
atggacgaatggaaccgcaatcaacatcgccgttcgggtctgtggcagcgcgtgatcgac
agtcaggtgacccacgcgcaggccgaagcgcagacggttgcattcctgagcgagtggatc
cgtgccggcgcctcgccgatgtgcggcaactcgatctgccaggatcgccgcttcctgcac
cgccagatgtcgcgcctggagcgctatttccattaccgcaacctggacgtgtccaccatc
aaggaactcgcgcgacggtgggcgccgacggtggccaacgggttcgccaagagttcggcc
cataccgccctgagcgatgtgcgcgattcgatcgacgagttgcgccactatcgtcagttc
atgggtgcgcttggtggcgataccgcagcgggtgtggagaactga
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