Xanthomonas citri subsp. citri Aw12879: XCAW_02038
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Entry
XCAW_02038 CDS
T02519
Symbol
pel
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci00040
Pentose and glucuronate interconversions
xci01100
Metabolic pathways
xci02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XCAW_02038 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XCAW_02038 (pel)
Enzymes [BR:
xci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
XCAW_02038 (pel)
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AGI07828
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Position
2245851..2246990
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AA seq
379 aa
AA seq
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MHLHLPTISLFFAIFITQAGIANADTGGFSSASVSGETAITVTTLAELQTALNAKNHHII
IRGKIYGGPKLTTLNFSSTIWNNITIEGAAGGGAALQNIQLKFSGENLPAGINIQNVVIR
NISFSGNIGDLQALPDQVKGTSNNTGINYVGVSLRRISNAWIDHCDFYDISDDLLSVGMS
SNYVTLSYNHFYFSNSWVNMNPDPVWNWVEKNYHDLANERLAILIGHNKKDSYVYGGNKL
HVTLHHNWFGPNLAGRPLLRGWVHAYNNYFDNSTSPNGERTAADGRGYEKQQYNALQVGS
GSIVFSESNYFYKTNNSNQIRLESDGDMYNFYEKENVYDAVTGNSAIGSTFNNAPVKYSY
EPDDSARVPGIVRSSAGPH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
ttgcatttacatttacctactatctcgctgttttttgccatttttatcacacaggctggt
atcgccaatgctgataccggaggattttcttctgcatctgtatctggcgaaactgccatt
acagtgacaacacttgcagagctgcaaacggcactcaatgccaaaaatcaccatatcatc
atccgtggaaagatctacggcggccccaaattgactaccctgaatttctccagcactatt
tggaacaacataacaatcgagggtgctgcaggcggtggagcggccttgcagaatatccaa
ttgaaatttagcggcgagaacttgcccgccgggataaacattcagaatgtggttatcaga
aacatctcattctctggcaatatcggcgacttgcaagccctgcctgaccaggtcaaagga
acgtccaacaacactggcatcaactacgtaggcgtatcattgcggcgtatatccaatgct
tggatcgaccattgcgatttctatgatattagcgatgaccttttatcagtcggcatgtca
tctaattacgtcacgctgtcgtacaatcacttttacttcagtaacagctgggtcaacatg
aatccggatccggtatggaactgggtcgaaaaaaattaccatgacctcgcaaatgagcgc
ttagcaatccttattggtcacaacaagaaagattcatatgtatatggcggcaataagctg
cacgtaacgctgcaccacaactggtttggccccaatcttgccgggcgccccttactgcgt
ggctgggtgcatgcctataataattactttgacaatagcacatcacctaatggtgagcga
accgctgccgatggtcgcggctatgaaaagcagcagtacaacgctttgcaggtaggtagc
ggcagtattgttttttccgaatcaaactatttctacaaaaccaacaatagcaaccagatt
cgactagaatcagacggtgacatgtacaatttttacgaaaaagaaaacgtttatgacgca
gtaacaggcaattcggcgatcggctcaaccttcaataatgcaccagtcaaatacagctac
gagcctgatgattcggcaagagtccccggaatcgttcggtcctctgcggggccgcactaa
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