Xanthomonas citri subsp. citri Aw12879: XCAW_02227
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Entry
XCAW_02227 CDS
T02519
Symbol
hcaD
Name
(GenBank) NAD(FAD)-dependent dehydrogenase
KO
K22549
D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci00470
D-Amino acid metabolism
xci01100
Metabolic pathways
Module
xci_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XCAW_02227 (hcaD)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NAD_binding_8
FAD_binding_3
FAD_oxidored
HI0933_like
GIDA
FAD_binding_2
NAD_binding_7
DAO
Thi4
AlaDh_PNT_C
Pyr_redox
Lycopene_cycl
NAD_binding_9
SO_alpha_A3
Pyr_redox_3
MurD-like_N
Amino_oxidase
Oxidored_nitro
XdhC_C
ELFV_dehydrog
Staph_opine_DH
Motif
Other DBs
NCBI-ProteinID:
AGI08016
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Position
complement(2485990..2487303)
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AA seq
437 aa
AA seq
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MAERVLHFDVLVIGAGPAGLAAARAAVSQGVRVGVVDMQPRTGGQVWRSDVHSGAPADAR
ALLQQVAGNASITVLTRTQILLAQPGWLLADGPTGTLQLHYAALVLATGARELLLPFPGW
TLPGVTGAGAAQALAKQGWPLAGKRVLVAGSGPLLLASAATLQRHGAHVLGIHEQTSPAA
LRQFALQLWRWPGKAAQAVALRLQLRAVAYRAGSMVIAAHGDTQLREVELAGPSGRTRLA
CDQLAVGYGLVPNTELAQLLGCQLQAYGAHQQVQVDALLRTSVTQIFAAGEVCGIGGRDC
ALIEGAMAGHMAADAPEAALRLQPRRHAARAFADLLQQQFALDPRIRTLAQADTLICRCE
DVPLAALDSFNDARDAKLVSRCGMGACQGRICGAALAELGRCPPDLSTDAGRRPPLFPVR
LAALADSFTSDSQGKHP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcgcgtgctgcatttcgatgtgttggtgatcggcgccggcccggccgggctg
gcggcggcgcgggcggcggtcagccaaggcgtgcgcgtgggcgtggtcgacatgcagcca
cgtaccggcggtcaggtgtggcgcagcgatgtgcactccggcgcgccggccgatgcgcgc
gcattgctgcagcaggtggcgggcaatgcatcgatcaccgtgctgacgcgcacgcagatt
ttgctggcgcaaccgggctggctcctggccgatggccccaccggcacattgcagctgcat
tacgccgcgttggtgctggccaccggtgcgcgcgaattgctgctgccattcccgggatgg
accctgcccggcgtcaccggtgccggcgcggcgcaggcgctggccaagcagggctggccg
ctggctggcaagcgcgtgctggtggccggcagtggcccgttgttgctggccagtgcagcc
acgttgcaacggcatggcgcgcacgtgctcggcattcacgaacagacctcgccggccgcc
ttgcgccagttcgcactgcagctgtggcgctggccgggcaaggccgcgcaggcggtggcg
ctgcgcctgcagctgcgtgcagtggcatatcgcgccggcagcatggtgattgccgcgcac
ggcgacacgcagttgcgcgaagtggaactcgccgggcccagcggccgcacgcgtcttgcc
tgcgatcaactggcggtgggctatggcttggtgcccaataccgagcttgcgcaattgctg
ggttgccagctgcaagcgtacggcgcgcaccagcaggtgcaggtggatgcgctgttgcgt
accagcgtcacccagatctttgccgccggcgaagtctgcggcatcggcgggcgcgactgc
gcattgattgaaggtgcgatggccggacatatggcggccgatgcaccggaggcggcgctg
cgcctgcagccacggcgtcacgccgcgcgtgcgtttgccgatctgctgcagcagcaattc
gcgcttgatccgcgcatccgcacgctggcgcaggcggacacgttgatctgccgctgcgaa
gacgtaccgctggccgccctggacagcttcaacgatgcacgcgacgccaagctcgtctcg
cgctgcggcatgggcgcctgccagggccgcatctgcggtgcggcgctggccgaactgggg
cgttgcccgcccgatctttccaccgacgccggccgccggccgccgttgttcccggtccgc
ctcgcggcgctggccgactcgttcacttccgactcgcaagggaaacacccatga
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