Xanthomonas citri subsp. citri Aw12879: XCAW_02622
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Entry
XCAW_02622 CDS
T02519
Symbol
pcnB
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XCAW_02622 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xci03019
]
XCAW_02622 (pcnB)
Enzymes [BR:
xci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
XCAW_02622 (pcnB)
Messenger RNA biogenesis [BR:
xci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XCAW_02622 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AGI08404
LinkDB
All DBs
Position
complement(2954433..2955800)
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AA seq
455 aa
AA seq
DB search
MGNPATQDGSAIIEPSVTSPFTLRVIPRDQHTISRKDISPNALRVLYRLRESGFGAYLVG
GAVRDLLVGGHPKDFDVATDATPEEVKALFRNCRLIGRRFRLAHVVFGREIIEVATFRAN
VDDGSGDRELDNGRLVRDNVYGTIEDDAIRRDFTCNALYYAIEDFSVRDYCGGFEDVQAR
LMKLIGDPQLRYQEDPVRMLRAVRLAAKLNFDIEAGTAEPIPRLAGLLSEAAPARLFEEI
LKLFLSGHGVASFEGLERYGLLGALFPESAAALKSNRSGALRAMVLEGLRNTDARVANDE
PVSPAFLFALLLWPAFCRTLMGLQAQGVQPEDAQRRAADRVTLHQLERVALPRRFSLPMQ
EIWLLQTRFSSRQRKRVFRTLSHPRFRAAFDFLVLRQFASPDHAADVEFWREAQKSSGQE
LVDAIESAQADHESDEGAPRKRRRRRRRTGAPAGE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaatcctgcaacacaagacggaagcgccatcatcgaaccctcagttacatctccg
ttcacgctgcgcgtcattccacgcgaccagcacaccatctcgcgcaaggacatcagcccc
aacgcgttacgcgtgttgtaccgcctgcgcgaatcgggctttggtgcctatctggtcggc
ggtgcggtccgcgacctgctggttggcggccacccgaaggatttcgacgtggccaccgac
gcgacgccggaagaggtcaaggcgctgttccgcaactgtcgcctgatcggccgccgtttc
cgtctggcacatgtggtgttcggtcgcgaaatcatcgaagtggccaccttccgcgccaat
gtcgacgatggcagcggcgaccgcgaactcgataacggccggctggtgcgcgacaacgtc
tacggcaccatcgaagacgatgcgatccgccgcgacttcacctgcaatgccttgtattac
gccatcgaggatttctcggtacgcgattactgcggtggcttcgaagacgtgcaggcgcgc
ctgatgaagttgatcggcgacccgcagttgcgttaccaggaagacccggtgcgcatgctg
cgcgcggtgcgtctggctgccaagttgaatttcgacatcgaagccggaaccgccgaaccc
attccgcgtctggccgggctgctgtccgaagctgcgcctgcgcggttgttcgaagaaatt
ctcaagctgttcctgtccgggcatggtgtggccagcttcgaaggcctggagcgttacggc
ctgctcggtgcgctgttcccggaaagcgcggcggcattgaagtccaaccgcagtggtgcg
ttgcgcgcgatggtgctggaaggcctgcgcaataccgatgcacgcgtggccaacgacgag
ccagtgtcgccggccttcctgtttgcgttgctgctgtggcctgcgttctgccgcaccttg
atggggctgcaggcgcaaggtgtgcaaccggaggatgcgcagcgccgcgcggccgatcgc
gtcaccttgcatcagttggagcgcgtcgcgttgccgcgccgtttctctctgccgatgcag
gaaatctggttgctgcagacgcgtttctcctcgcgtcagcgcaagcgggtattccgcacc
ttgtcgcatccgcgcttccgcgcggcattcgatttcctggtgttgcgtcagttcgcgtcg
cccgatcacgccgccgatgtggagttctggcgcgaggcgcagaagtcgtccggccaggag
ctggtggatgcgatcgaatcggcgcaggccgaccacgagagcgatgagggcgcaccgcgc
aagcgtcgccgacgccgccgtcggaccggcgcaccggccggcgagtag
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