Xanthomonas citri subsp. citri Aw12879: XCAW_02865
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Entry
XCAW_02865 CDS
T02519
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xci03400
]
XCAW_02865 (phrB)
Enzymes [BR:
xci01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
XCAW_02865 (phrB)
DNA repair and recombination proteins [BR:
xci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
XCAW_02865 (phrB)
Prokaryotic type
XCAW_02865 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CUB_M02D8_5_4th
Motif
Other DBs
NCBI-ProteinID:
AGI08642
LinkDB
All DBs
Position
complement(3190777..3192195)
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AA seq
472 aa
AA seq
DB search
MSYAIVWFRRDLRLEDNPALRAALDAGHHPIPLYIDAPHEEGEWTPGAASRTWRHRSLAA
LDGALRALGSGLVIRVGNSAQVLDEVIAQTGAVAVYWNRKYEPATQPRDAQIKRDLRERG
IEVQSCNCALLFEPWQLSTQQGGPYKVFTPFWRNALTQLQLPVAIGAPRSLPPLPASLKT
DALDTLQLVPGLQWDQGFWEHWQPGEAGAHEMLEIFIDGALSGYRENRDRPDRVGTSQLS
PHLHFGEIAPWRIANTLETHRTARNGAEIDAYIRQLGWRDFAYHLLHHFPDTTNQNLNPR
FAGFDWATVDPVALQAWQRGRTGIPIVDAGMRQLWHTGWMHNRVRMIVASFLCKHLRIHW
IEGARWFWDTLVDADLANNTLGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQAAYITRWV
PELGKLAVKERFAPWLHPLSLARLAPEYPRTPIIGLAEGRDAALAAYAKTRG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacgccatcgtctggttccgtcgcgatctgcgtctggaagacaacccggccttg
cgcgccgcactcgatgcggggcatcacccgattccgttgtacatcgacgcgccgcacgaa
gagggcgaatggacgcctggcgccgcatcgcgcacctggcggcatcgctcgcttgcagcg
ctggacggcgccttgcgcgcgctcggcagcgggctggtcattcgcgtcggcaacagcgcg
caggtgctggatgaggtgatcgcgcagaccggtgcggtggcggtgtactggaaccgcaag
tacgagccggccacccagccgcgcgatgcgcagatcaagcgcgatttgcgcgagcgcggc
atcgaggtgcagagctgcaattgcgcattgctgttcgaaccgtggcagttgtccacgcag
cagggcggcccctacaaggtgtttaccccgttctggcgcaacgcgctgacgcagttgcaa
ttgcccgtcgcgataggtgcgccgcgcagtctgccgccattgcctgcaagcttgaagacc
gatgcgctcgacacgctgcaattggtgccgggcctgcagtgggaccagggtttctgggag
cactggcagcccggcgaagccggcgcgcacgaaatgctggagatctttatcgacggcgcg
ttgtctggatatcgcgaaaaccgcgatcgccccgatcgcgtcgggacctcgcaactgtcg
ccgcatctgcacttcggcgaaattgcgccgtggcggatcgccaacaccctggagacgcat
cgcactgcgcgcaatggcgcagaaatcgatgcctatatccggcagcttggctggcgcgac
tttgcctatcacttgctgcatcacttcccggacaccaccaaccagaatctcaatccacgc
tttgcaggattcgattgggcaacggtcgatccggttgcattgcaggcctggcagcggggc
cgcactggcattccgatcgtcgatgccggcatgcgccagctctggcataccggttggatg
cacaatcgcgtgcgcatgatcgtcgccagttttttgtgcaagcatctgcgcatccactgg
atcgaaggcgcgcgctggttctgggacacgctggtggatgcggacctggccaacaacacc
ctgggctggcagtgggtggccggcaccggcgccgatgcggcgccgtatttccgtgtgttc
aatccggtcacgcaggcggagaagttcgatccgcaggccgcctacatcacgcgctgggta
cctgagctcggcaagcttgcggtgaaggaacgcttcgcgccgtggctgcatccgttgtcg
ctggcgcggctggcaccggagtatccgcgcacgccgatcatcggcctggccgaagggcgc
gatgcggcgctggcggcgtatgcgaaaacgcgcggctag
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