Xanthomonas citri subsp. citri Aw12879: XCAW_03216
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Entry
XCAW_03216 CDS
T02519
Symbol
csdB
Name
(GenBank) Selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci00450
Selenocompound metabolism
xci01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
XCAW_03216 (csdB)
Enzymes [BR:
xci01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
XCAW_03216 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
XCAW_03216 (csdB)
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Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AGI08991
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Position
3588031..3589275
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AA seq
414 aa
AA seq
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MNVSAVPPSATPDWDRVRLDFPLLMRQVHGKPLIYFDNANTGQKPLQVIAATDEFYRRQN
ANVSRAVHALGSEATDAFEGARNKLARFLNVRADELVLCSGTTFAINLVAYSWALPRLGA
GDVILISRMEHHANIVPWQLVAQRTGATIRVAEITPDGALDLDGLRKAMTPDVKLLAITH
VSNVLGTVNPVREICREARKRGIVTMVDGSQAAPHRRIDVASIGCDFYAITGHKMCGPTG
TGALWARREHLKAMPPFLGGGEMIKEVSFENTVFNDAPHKFEAGTPNIAGFVGLGAAVDY
LESIGLAHVEAREAELLAHFTEELQRIDGLRIFGTTPDKAAVVSFLIDGAHAHDLATLLD
LEGVAVRSGQHCAHPLLQYYGVAATCRASLAFYNTHDEIERFVAALVKVRRLLG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtccgccgttccgcccagcgcaacgcccgactgggaccgcgtgcgcctggat
ttcccgctgctgatgcggcaggtgcatggcaagccgctgatctatttcgacaacgcgaac
accggccagaagccgctgcaggtgattgccgccaccgacgagttctaccgccgccagaac
gccaacgtaagccgtgccgtgcatgcgctcggcagcgaggcgaccgacgcgttcgaggga
gcgcgcaacaaactggcgcgttttctcaacgtccgcgccgatgagctggtgctgtgcagc
ggcaccaccttcgcgatcaatctggtggcgtattcgtgggcattgccgcggctgggcgcc
ggcgatgtgatcctgatttcgcgcatggagcaccatgccaacatcgtgccgtggcagctg
gtggcccagcgtaccggcgccaccatccgcgtggccgaaatcacgcccgatggcgcgttg
gatctggatggcttgcgcaaggcgatgacacctgacgtcaaactgctggcgatcacccac
gtgtccaacgtgctgggcacggtcaacccggtacgcgagatctgccgcgaagcgcgtaag
cgcggcatcgtcaccatggtggacggctcgcaggcggcaccgcatcggcgcatcgacgtg
gccagcatcggctgcgatttctatgccatcaccgggcacaagatgtgcggccccaccggc
accggcgcactgtgggcacgtcgcgagcatctgaaggcgatgccgccgtttcttggcggc
ggcgagatgatcaaggaagtcagcttcgagaacaccgtcttcaacgatgcgccgcataag
ttcgaagccggcacgcccaacatcgccggtttcgtcggcctgggtgcggcagtggattac
ctggaatcgatcggcctggcgcacgtggaagcacgcgaagccgaactgctcgcccacttc
accgaagaactgcaacgcatcgatggcctgcgcatcttcggcaccacgcccgacaaggcc
gcggtggtgtcgttcctgatcgacggtgcgcacgcgcacgacctggccaccctgctcgac
ctggaaggcgtcgcggtgcgctcgggccaacactgcgcgcatccgctgctgcagtactac
ggtgtcgccgccacctgccgcgcgtcactggcgttctacaacacgcacgacgaaatcgag
cgcttcgtcgccgcgttggtgaaggtgcgtcgactgttgggctga
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