Xanthomonas citri subsp. citri Aw12879: XCAW_03468
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Entry
XCAW_03468 CDS
T02519
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci00300
Lysine biosynthesis
xci00470
D-Amino acid metabolism
xci01100
Metabolic pathways
xci01110
Biosynthesis of secondary metabolites
xci01120
Microbial metabolism in diverse environments
xci01230
Biosynthesis of amino acids
Module
xci_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XCAW_03468 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XCAW_03468 (lysA)
Enzymes [BR:
xci01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XCAW_03468 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NACHT_N
DUF6401
Motif
Other DBs
NCBI-ProteinID:
AGI09242
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Position
3888859..3890028
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AA seq
389 aa
AA seq
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MLAALPRVRERCDGPICAYVYDLAALDTHAAWMRAQLPAQCELFYAAKANAEPPILRTLA
PHVDGFEAASGGELAWLHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERL
AEVASHAGRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPCDLHAAMQRLQASPSLRL
AGFHFHLMSHQRDATAQLHLVAAYLRTVQQWRQAYALGPLRVNAGGGFGVDYLAPEASFD
WAGFCAGLPALLREHATDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHH
FRTPAAQGHDHPFRVLRGERAPVLRDTPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFP
LAGAYAWNISHQRFLMHPAPQMVFLTEGH
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgccttgccgcgggtgcgcgaacgctgcgatggtccgatctgcgcgtatgtc
tacgatctggccgcattggacacgcacgcggcctggatgcgtgcgcagttgccggcgcag
tgcgaactgttctatgcggccaaggccaatgcagagccaccgatcctgcgcacgctggca
ccccatgtggacggcttcgaggccgcctccggtggcgagctggcctggctgcatgcgcag
caaccacaggcgcccttgctgtttggcggaccgggaaaactcgacaccgagctcgcccag
gcagccgccctgcccgactgcaccgtgcatgtggaaagcctgagcgaactcgaacggctg
gcggaggtcgcttcgcacgccggccgctgcgtgccggtgtttctgcgcatgaatatcgcc
gtgcccggcgcgcaaagcacgcgcttgatgatgggcgggcaaccctcgccgttcggtctg
gatccgtgcgatctgcatgcagcgatgcagcgactgcaggcgagcccatcgctgcgcctg
gcaggctttcatttccatctgatgtcgcatcaacgcgacgccaccgcgcagctgcatctg
gtcgccgcctacctgcgcaccgtgcagcaatggcggcaggcctatgcgcttggcccactg
cgggtaaacgccggtggcggcttcggtgtggattatctggcaccggaagcgtcgttcgac
tgggctggcttctgcgccgggctgcctgccttgctgcgcgaacacgctacggacctgcgc
ctgcggctggagccgggccgttacgtcagcgccagctgcggctggtacctgatggaggtg
ctcgatctcaaacgcagccacggcgcctggtttgcgatcgcccgcggtggcacgcatcac
tttcgtacgccggccgcgcaaggccacgatcatccgttccgtgtattgcgcggtgagcgt
gctccagtgttgcgcgataccccggtgaccctggtcggccagttatgcacgcccaaggat
gtgctggcacgcgaccagcatgtcgccgcgctggcgcctggcgattgcctggccttcccg
ctagcgggcgcctatgcgtggaatatttcgcaccagcgctttctgatgcatccggcaccg
cagatggtgtttctaacggaggggcattga
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