Xanthomonas citri subsp. citri Aw12879: XCAW_03920
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Entry
XCAW_03920 CDS
T02519
Symbol
peh-1
Name
(GenBank) Endopolygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci00040
Pentose and glucuronate interconversions
xci01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XCAW_03920 (peh-1)
Enzymes [BR:
xci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
XCAW_03920 (peh-1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AGI09685
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All DBs
Position
complement(4385913..4387304)
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AA seq
463 aa
AA seq
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MKLLTAAIGGVCLTLAAQAGAVTIATGDTRAVVQPAIPATCQPSLKASQTPTGRQFDAAL
ESAPPDTKAIQAALNACKNGSVLLTSGSGNAFLTGPLSIPANVTLVIDQGVTLYGSRNPA
DYGSGCGTAGSKSGACLPLISVKGNNAGVMGIRTGGRQGTIDGRGDQTMLGKSTTWWEFG
ENAKKANQVQNSPDLIKVQNSSEFTLYDVNLINAAYFHFFSHIVNGLTIWGVRVRSPATS
PNTDGLDLDSVVNATIHDSDVMGGDDCVAIKTIASRSANITVRNSRCYGTHGISIGSEVM
SGVSNVLVDNNALVSTDDLGNRSTDNSGLRIKTSLAKGGPVSLITYRNTCLYGVSSPVVI
NPFYAAATSGTKPTFSQIVVDGLKTGNDAGGKGWILKGFDAQTPLDLVLANVAHSDASIS
ASNAQIGLSNSAVTPSGTGVTTGTVQVGGVVPTCSGAPGFPAL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcttaccgctgccatcggcggcgtttgtctgacgcttgctgcgcaagccggc
gccgttacgatcgctaccggcgatacgcgcgctgtcgtgcaaccggcgattcccgccact
tgtcagccgtccttgaaggccagccagacgccgaccgggcggcaattcgacgccgcgctg
gaaagcgcgccccccgataccaaggccatccaggccgcgctcaacgcctgcaagaacgga
agcgtgctgttgaccagcggcagtggcaacgcgtttctgaccgggccgttgtccatcccg
gccaacgtcaccctggtcatcgaccagggcgtaaccttgtacggctcgcgcaacccggcc
gactacggcagcggttgcggcaccgccggttccaagagcggtgcttgcctgccgttgatc
agcgtcaagggcaacaacgcaggcgtgatgggcatccgcaccggcgggcgtcagggcacc
atcgatgggcgcggcgaccagaccatgctgggcaagagcaccacctggtgggagttcggc
gaaaacgccaagaaggccaatcaggtgcagaacagcccggacctaatcaaggtgcagaat
tccagcgagttcacgctctacgacgtcaacctgatcaatgcggcgtacttccatttcttc
tcgcatatcgtcaatggcctcaccatctggggcgtgcgggtgagatcgccggccaccagc
cccaataccgacggcctggatctggacagcgtggtcaacgccaccatccacgacagcgat
gtgatgggcggcgacgactgcgtggcgatcaagaccatcgcctccaggtcggcgaacatc
accgtgcgcaactcgcgctgctacggcacccacggcatctcgatcggaagcgaagtgatg
tccggcgtcagcaatgtgctggtcgacaataatgcgctggtgtccaccgacgatctgggc
aaccgcagcaccgacaacagcggcctgcgcatcaagaccagcctcgccaagggtggtccg
gtcagtctgattacctatcgcaacacctgcctgtacggcgtcagcagcccggtggtgatc
aacccgttctacgccgccgcaaccagcggtaccaaaccgaccttcagccagatcgtggtc
gatgggctcaaaaccggcaacgacgccggcggcaagggctggatcctgaaaggcttcgat
gcgcagacaccgctggatctggtgttggccaacgtggcgcacagcgacgcgtcgatcagc
gccagcaacgcacagatcgggctgagcaacagcgccgtcacgccgtcggggactggcgtc
accaccggcaccgtgcaggtcggcggtgtggtgcccacctgctcgggcgcaccgggcttc
cccgcgctgtga
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